Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01024 ATGAAACTTAGAAAAGGGTTTTTAAAAACTTTTCCACCGTCACTCCCACGACTTTGCCCCAACCCTCTTCTCCCTCCTCTCCCCCACCGGCACCCTTGCCTCCGCCACCGCCACTGTCGACCACCTTGCGACGCCGTTAGCAGTTGCCGGAGTTTGAACGCGACCATCCTCAATATCGACGTTGGGCATAAGATGGTTATCGGGTTCGAATCGGTGGGGTCCTCGCTGGCGTACCAGGCGTTCACCTCTGGACTGTTTGCCAGACTTGTTGCGGAACTTACTGCAGCTCGATCTATGTCCTTTGTTGGCACTCATGAGTACCTTGCCCGAGAAATTATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACTTTTGGATTTTCTTGCATGAGCTGTTATATGGTAAAAGCCCTTTCAAAGGCCGTTAGGGATATGATTCGTGGCTTGCTAGTGAAGGAGCCACAACATTGTCTAGGGGTTAAAAGAGGTACAACAGAGATTAAGCAACAACCCTTCTTTGAAGGTGTGAACTCGGCATTAATTAGGTATAGCACACTGCCAGAAGTGTTGAGACAGGTGGAAAATGAACTACCGAGGAAGGTTGGACCAACTAATAATGTCGTTGGGCTTGGTAGCACTAGTAAGGGTATAGTTGGTACTACTACTGCCAACATGAAGCCATGGCTGGCTGAAGATGGAGAAGAAAAGAGTACCTGCAGAACCCCTGAGCGAAGAAAAAAATGGATTCCAAATGAGGTTAAAGTAATAAAGCCTGATGTTATGATGATTTAG 798 0.4749 MKLRKGFLKTFPPSLPRLCPNPLLPPLPHRHPCLRHRHCRPPCDAVSSCRSLNATILNIDVGHKMVIGFESVGSSLAYQAFTSGLFARLVAELTAARSMSFVGTHEYLAREIIKGEGHGSAVDWWTFGFSCMSCYMVKALSKAVRDMIRGLLVKEPQHCLGVKRGTTEIKQQPFFEGVNSALIRYSTLPEVLRQVENELPRKVGPTNNVVGLGSTSKGIVGTTTANMKPWLAEDGEEKSTCRTPERRKKWIPNEVKVIKPDVMMI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01024 265 SUPERFAMILY Protein kinase-like (PK-like) 93 197 IPR011009 -
Vian4g01024 265 Gene3D Transferase(Phosphotransferase) domain 1 137 193 - -
Vian4g01024 265 Gene3D Transferase(Phosphotransferase) domain 1 95 134 - -
Vian4g01024 265 PANTHER FLIPPASE KINASE 1-RELATED 86 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01024 Vian-Chr4 15844340 15846352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01024 83 221 AGC Kinase Gene Family AT2G44830 54.545 8.97e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vian4g01024 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01024 - K08286 aew:130777739 170.244