Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00979 ATGGCCAAAACGGAGATGTCTAGAACTGAACTCAATGTAAATCAAGGAGAACCAACACGAGTTCAGCCTGCAAAGGAAACAGAAAAGGGACATTACTTCCTTTCAAATCTTGACCAGAACATTGCTGTTCCAGTGCGCACGGTGTACTGCTTCAAATCTGCTTTCAGAGGAAACGAGGATGCTGCACAAATTATCAAGGATTCCTTGTCGAAGATTCTTGTCCCTTATTACCCGATGGCAGGCACGCTGTCTATAAGCTCGGAAGGGAAGTTGATAGTGCATAATCCTGGGGAGGGTGCATTGTTTGTGGAGGCTGAAGCAAATTGTGACATCGAAGAGATAGGAGACTTGACGAAACCAGATCCTCATACTCTTGGGAAACTGGTTTACAATGTTCCTGGTGCTCGAAACATTCTTGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAGATGCGGAGGTTTTACTTTGGGGCTTTGCATGAACCACTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGACAGCTCGAGGTTTAGACTTAAAGATCCCACCATTTCTTGATCGAACTATAATCAAAGCACGTGATCCTCCCAAAGTAGAGTTCAAACACAACGAATTTGCCGAAATAGAGGATGTGTCAAACACTAGAAAGCTTTATGAGGAAGAAAACATGCTCTACAGATCCTTCTTCTTCGATCCTGAGAAGCTCGATCTACTTAAGAAAAAGGTCACAGAAGACGGTATTTTGAGCAAGTGCTCAACTTTTGAAGCGCTCTCAGCGTTTGTGTGGAGAGCTCGAACTGCAGCATTAAGGATGCAACCTGAGCAACAAACAAAGCTTCTCTTTGCAGTTGATGGAAGGTCAAGATTCGTTCCCCCAATACCAAAGGGGTACTTTGGAAATGGTATTGTGTTGACAAATTCGTTGTGTGAGGCTGGGGAGTTATTGAGGAACCCTTTGTCATATTCCGTGGGATTGATTCGCAAGGCAATTGACATGGTCACTGATAGTTACATGAGATCTGCCATTGACTATTTTGAAGTCACAAGAGCTAGGCCATCTCTTACAGCCACCCTTTTGATCACAACTTGGACTAAGTTGTCTTTCCACACCACAGATTTTGGCTGGGGAGAACCTCTATGTTCTGGTCCTGTGACTCTGCCAGAGAAAGAAGTCATTTTGTTTTTATCACATGGTCAAGAAAGGAAAAACGTAAATGTTCTTCTGGGTTTGCCCAAGTCTGCCATGGAAATTTTTGAAGATTTGTTGATGCAAGTGTGA 1305 0.4352 MAKTEMSRTELNVNQGEPTRVQPAKETEKGHYFLSNLDQNIAVPVRTVYCFKSAFRGNEDAAQIIKDSLSKILVPYYPMAGTLSISSEGKLIVHNPGEGALFVEAEANCDIEEIGDLTKPDPHTLGKLVYNVPGARNILEMPLMTVQVTKFRCGGFTLGLCMNHCMKDGLCAMEFVNAWSETARGLDLKIPPFLDRTIIKARDPPKVEFKHNEFAEIEDVSNTRKLYEEENMLYRSFFFDPEKLDLLKKKVTEDGILSKCSTFEALSAFVWRARTAALRMQPEQQTKLLFAVDGRSRFVPPIPKGYFGNGIVLTNSLCEAGELLRNPLSYSVGLIRKAIDMVTDSYMRSAIDYFEVTRARPSLTATLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSHGQERKNVNVLLGLPKSAMEIFEDLLMQV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00979 434 Gene3D - 216 434 IPR023213 -
Vian4g00979 434 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g00979 434 FunFam Tryptamine hydroxycinnamoyl transferase 218 432 - -
Vian4g00979 434 Pfam Transferase family 15 429 - -
Vian4g00979 434 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Vian4g00979 434 Gene3D - 7 215 IPR023213 -
Vian4g00979 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 429 - -
Vian4g00979 434 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00979 Vian-Chr4 14587691 14599670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00979 11 434 Monolignol Biosynthesis Gene Families AT5G48930 36.136 1.32e-89 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00979 K15400 - gmx:100794490 775.393