Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00974 ATGGAGAAACACCAAGTTATGCTCCCTACCGCATGTACCTCATCAACAGCTTTATCCTCTCATTTTAAACATGTTGAGAAACAGGTTTCAGAGATCTCATCTCAGAACCAAAGTGACAAGGAAGCTAAGCACCACCGATATGCATTTCAAACGAGAAGCGCTGTTGATGTTCTGGATGATGGGTACCAGTGGAGAAAATATGGGAAAAAGATAGTCAAAAACAATAGTTTTCCAAGAAGTTACTACAGGTGTGCTCATCGAGAGTGCAATGTTAAGAAACAAATCCAGCGTTCCAACGATGAAGAGATTGTGGTCACAACCTACGAAGGAACACATACACACCCTGTGGATAAATCAGTGGAAACCTTCGACCAGATCTTGGGCAACCTACTCAATAATGCACCTCCCACATTGGAATAG 420 0.4238 MEKHQVMLPTACTSSTALSSHFKHVEKQVSEISSQNQSDKEAKHHRYAFQTRSAVDVLDDGYQWRKYGKKIVKNNSFPRSYYRCAHRECNVKKQIQRSNDEEIVVTTYEGTHTHPVDKSVETFDQILGNLLNNAPPTLE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00974 139 SMART WRKY_cls 58 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g00974 139 FunFam WRKY transcription factor 57 44 117 - -
Vian4g00974 139 Pfam WRKY DNA -binding domain 59 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g00974 139 Gene3D WRKY domain 40 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian4g00974 139 ProSiteProfiles WRKY domain profile. 53 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g00974 139 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 28 119 IPR044810 GO:0003700
Vian4g00974 139 SUPERFAMILY WRKY DNA-binding domain 50 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00974 Vian-Chr4 14455142 14456871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00974 46 130 WRKY Transcription Factor Family AT5G13080 68.605 2.92e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian4g00974 WRKY 6.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00974 - - vum:124842421 277.715