Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00892 ATGGAAGAAAATGTAATTGACATTACAGGTTTACTGGTATGTCCACAACTGGTGGCAGGAACAATAGCGTTTACATTTGTGGCACCGCCAAAAGCTCTTCTTGGTATAGAGACCATGGCACATCTAGGTCTCATCTACAATGTCTTCCTAACTGGCTTGGAGATGAACCTAGACGCTATCCTGCTAGCAAGAAGAAAGGCCACAACCATTGCTATGGTTAGCACCATCATTCCAATGTTATTAGGAGCTGCAATATATTCTATGGCTCAAGCTCTCTACAAGGGTCCTAACCTTGACATGTCACTTTACAACACACCTAGTGCATATTTATTCTGGGCTTTGGTCCTCAGTGTCACAAACTTCCCTGTCCTCGCTCACATTCTTGCTGATCTTAAGATCCTCTATACAGAGCTAGGTAGAGTGGCTGTAACTGCAGCCACAATAAGCGACTTCTACAATTGGGCAATGTTTGTGTTGCTCATCCCATTTGCTTGTCATAGTCAAAGACCCTTTCTCTCGGTGATATTAACCATTTTCTTTCTGCTCTTCTGCTACTTGGTGTTGCGCCCATTCCTTACCAAGTTGTTGAATAAGGAAACAGAAAATAATGAATGGGACAATTACAAGTTATCGTATGTTCTGGTTGGTGTTTTGGCTTGTGCACAAGTGACTGAAATTCTAGGTACACATTCCGTTGTTGGAGCGTTGGTGTATGGATTGATGCTTCCTCGTGGAAAATTTGCTGACATGTTGATCGAAAGGTCAGATGATCTTGTCTCCATGTACCTGGAACCGTTGTTCTTTGTTGGCTGTGGCATAAGATTCGACTTTTCTAGTTTTAAACTGCACAAAGTTCTTAACGTGATCATAATTATTGTCATGTCATGCTTCACTAAGATTGTGAGCACTGTAATAACTGCATGGTTCTATAGCATGCCTTTTCGAGACGGTGTGGCACTTGGAGCACTTTTGAACACCAAAGGCATCTTGCCGTTAGTAATGCTAAACATTGCAATTGACAGACAGATTTTGAGTAGGGATTTCTATACAATCATGGTTGTGGCTAGTGTTGTGATGACCATACTAGTGACTCCGACCATCAACTTCATATACAAGCCAAGAAAGCAGTTTAAGAAAAACAAGCTGAGGACTGTGCAAAACTTGAAGGCTGATGCAGAGATCAGAATTATGGTCTGCGTTCACAACCCTCGCCATGCCACAGGAATGATGAGCATTCTTGAAGCATGCAGTTGCGCCAATGCCACCCATCTACGCGTGTTTGCTCTTCAACTCATTGAGCTGAAAGGACGTGGCACTGCCTTTCTGATAGACGAGGGCGGTGGTTCCCAACAATCACAAGCAGACACTGAGAGCATCAGAGATATCTTCTCAGAGTTCAAACTAGAACGAGGGCTCACCAACGCTAGCGTGGAGACTCTCGCTGCAGTGTCCTCCTATGAGACCATTCACAAGGACATCTACAACATAGCTGACGAGAGACAGACGTCCTTGATTCTCCTTCCGTTCCACAAACATTCAGGCGTGGAGGGTGCCCTAGAGGAGACAAACCCTGTGTTCAGAGAGATAAACAGAAATGTGATGCGCTATGCACCATGTTCTGTGGGAATCTTGGTTGACCGTGGACACAGGTTACCGTCTGAGATGAACATGTATGTTGCCATTGTCTTCATTGGAGGGCCTGATGACCGTGAAGCCTTGGCTATTGCTTGGAGAATGGCAAGGCATAAAAGGATTCATCTCTCAATGGTAAATATTCTTCTGTTTGGAAAGGTTGCTGAAGTGGATACAAGTGAAACAATCAATGATGAAGCCAACGGGATATTGTCCCCTATGTTGGACAGTGTAAGGGAAAAGGAGTTGGACGAGGAGTATATGAGTTTGTTCAGACTCATGGCAGTGAACAATGAGCATTCCGTAACTTATTCAGAGAAGGAAGTGCACACTGCTGATGATATTCCGTTGGTTCTGGATGAATTGGAAAGGGAGGGCTATGATTTGTATGTTCTAGGGCATGGAAAAAGAAGGAACTCTACGGTGCTGTCAAAATTGTTAGAATGGACTGATTGTCCTGAACTTGGGGTTATGGGGGACATGCTTGCATCGAATACTTTGGGTTCATGCTCTTCGGTGCTTGTGGTGCAACAATATGGGTTTGGAGGCATGAACTTGAGGTCTATTAACCAAACCACATGTGAAAGCAATGATGACGACATTGAAGCAATTTTTAAGGTCAAGAGCATCAAATATAATTGGTGA 2277 0.4379 MEENVIDITGLLVCPQLVAGTIAFTFVAPPKALLGIETMAHLGLIYNVFLTGLEMNLDAILLARRKATTIAMVSTIIPMLLGAAIYSMAQALYKGPNLDMSLYNTPSAYLFWALVLSVTNFPVLAHILADLKILYTELGRVAVTAATISDFYNWAMFVLLIPFACHSQRPFLSVILTIFFLLFCYLVLRPFLTKLLNKETENNEWDNYKLSYVLVGVLACAQVTEILGTHSVVGALVYGLMLPRGKFADMLIERSDDLVSMYLEPLFFVGCGIRFDFSSFKLHKVLNVIIIIVMSCFTKIVSTVITAWFYSMPFRDGVALGALLNTKGILPLVMLNIAIDRQILSRDFYTIMVVASVVMTILVTPTINFIYKPRKQFKKNKLRTVQNLKADAEIRIMVCVHNPRHATGMMSILEACSCANATHLRVFALQLIELKGRGTAFLIDEGGGSQQSQADTESIRDIFSEFKLERGLTNASVETLAAVSSYETIHKDIYNIADERQTSLILLPFHKHSGVEGALEETNPVFREINRNVMRYAPCSVGILVDRGHRLPSEMNMYVAIVFIGGPDDREALAIAWRMARHKRIHLSMVNILLFGKVAEVDTSETINDEANGILSPMLDSVREKELDEEYMSLFRLMAVNNEHSVTYSEKEVHTADDIPLVLDELEREGYDLYVLGHGKRRNSTVLSKLLEWTDCPELGVMGDMLASNTLGSCSSVLVVQQYGFGGMNLRSINQTTCESNDDDIEAIFKVKSIKYNW 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00892 758 Pfam Sodium/hydrogen exchanger family 18 370 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian4g00892 758 Gene3D - 8 381 IPR038770 -
Vian4g00892 758 Gene3D - 394 703 - -
Vian4g00892 758 PANTHER CATION/H + ANTIPORTER 8 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00892 Vian-Chr4 12601876 12604699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00892 10 723 Antiporter Super Family AT2G13620 36.066 4.51e-163 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00892 - - vum:124819980 1445.64