Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00856 ATGGAGGAAACATTTGTTCCCTTCCGTGGGATTAAGAATGACCTCAAAGCAAGAATTACATGCTACAGACAAGATTGGAGCAGTGGATTCCAAGCAGGAATCAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGCGAGCAACTCGAGAGAAATACTGATGGAACTCTCACTGCTGTTCAAACTCTTGCATCAACTGCACTCTGTGGAGTTATCCACTCAATCATTGGAGGCCAGCCTCTGCTCATACTCGGCGTAGCTGAGCCAACAGTTCTGATGTATACATTCATGTATAACTTTGCTAAGGATCGTGAGGATTTGGGACACAAACTATTCCTACCTTGGACTGGATGGGTGTGTGTTTGGACTGCCCTGTTGCTTTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCAATAGATTCACACGTGTTGCTGGCGAATTATTTGGTCTGTTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTGCCTAAGAACCAGAGAGAAGGTACCAATCAGATTGCCCTCCAGTCATCTTGGTTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGTCTTCTTTATACTGGTCTACAAAGCCGCAAAGCTAGATCCTGGCGTTACGGGTCAGGTTGGCTACGGGGATTCATAGCTGATTATGGAGTCCCTCTAATGGTTCTGATATGGACTGCTGTGTCTTACATACCAGTCAATAAGGTTCCAAGGGGAGTCCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCCGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCCATCCTGTATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTCGATCACAGTGTTGCATCACAACTTGCTCAGCAGAAGGAGTTCAATCTAAGAAAACCGTCATCTTATCATTATGATTTGCTGCTCTTGGGATTTTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCTTCTAATGGTGTGATTCCTCAATCTCCAATGCACACGAAGAGCTTAGCTACTCTAAAACATCAGCTTTTACGGAATAAGCTTGTATCTACTGCACGAAAAAGCATGAGGAGGAATGTTAACTTGAGCCAGTTGTACCAAAATATGAAAGAAGCATATGATGAAATGCAGACTCCATTGGTTCCCCAAATGCCACCTACCTTGGGGCTGAAAGAACTGAAGGAGTCTACTATTGAACTGGCTTCAAGTCATGGATATATTGATGCCCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTCGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAACGTCTAAGCAATCTGCTTCAGGCATTGATGGTTGCAGCTTGTGTTGCTGCCATGCCCCTTTTGAAGAAGATACCCACTTCAGTGCTTTGGGGCTACTTTGCCTTTATGGCCATTGAAAGCTTACCAGGAAATCAGTTTTGGGAGCGAATCTTGTATCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAATACCATGCCACCTTTGTTGAGACGGTTCCCTTCAAAACAGTTGCTATGTTTACTGTGTTCCAGACAGTGTACTTGCTTCTCTGCTTTGGCTTAACCTGGATACCAATTGCTGGGGTCCTTTTCCCACTGTTAATCATGCTTCTTGTCCCAGTACGGCAATATTGCCTTCCAAAGTTTTTCAAAGGTGCCCATCTTCAGGAGCTCGATGCAGCAGCATATGAAGAAGCACCTGCCATTGCTTTCAACATGTCCTTTGAAGGTCAAGGTGGACAAGCACCAACAGTAAATATTAGTGGTGGGGAAATTCTTGATGAAGTTATTACTCGGAGTCGTGGAGAGATTCGACGCACACAAAGCCCGAAAACAACAAGTTCAACACCAACTTCAACCGGAGATATAAGACCAGCTAGTAGCCCTCGGATAGGAAGAAGCATTCCTAGCCCTCGAGTGACTGAATTGAGAGGGGAAAGCAGTCTGAGACCATCTGGGAAGGAGATCAAGTTAATACAAACACCTAGTCCACGCTCACCAGTTCTTGGAAAAGTTACCAAAGGTTCACCTTCAAGCTAA 2169 0.4408 MEETFVPFRGIKNDLKARITCYRQDWSSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGVIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDREDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFGVPKNQREGTNQIALQSSWLFGNGMFALVLSFGLLYTGLQSRKARSWRYGSGWLRGFIADYGVPLMVLIWTAVSYIPVNKVPRGVPRRLFSPNPWSPGAYSNWTVVKEMLNVPILYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQNMKEAYDEMQTPLVPQMPPTLGLKELKESTIELASSHGYIDAPVDEVVFDVNKDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTVAMFTVFQTVYLLLCFGLTWIPIAGVLFPLLIMLLVPVRQYCLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEGQGGQAPTVNISGGEILDEVITRSRGEIRRTQSPKTTSSTPTSTGDIRPASSPRIGRSIPSPRVTELRGESSLRPSGKEIKLIQTPSPRSPVLGKVTKGSPSS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00856 722 MobiDBLite consensus disorder prediction 642 722 - -
Vian4g00856 722 MobiDBLite consensus disorder prediction 650 668 - -
Vian4g00856 722 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vian4g00856 722 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vian4g00856 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Vian4g00856 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00856 Vian-Chr4 11740319 11744756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00856 1 697 Antiporters AT3G62270 75.321 0.0 1064
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00856 K24194 - gmx:100793554 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00856 4 11740319 11744756 Vian4g00856 4 11740319 11744756 ECH
Vian1g01202 1 12934919 12939377 Vian4g00856 4 11740319 11744756 PCT