Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00807 ATGGCTGCCGCCAGCGATGTTTTCAGGCCGGAAGTGGGTTCCGGGAAGCTCCACGTCCTTGCCGTTGATGACAGCCACGTCGACCGCAAGGTTATTGAGAGGTTGCTCAAAATCTCTTCTTGCAAAGTGACGGTGGTGGAAAGTGGAAGCAGGGCTCTGCAGTATCTGGGGTTGGATGGAGAGAAGAGCTCCATTGGTTTTGATAGTGTCAAGGTTAATTTGATAATGACAGACTACTCCATGCCGGGTATGACAGGATATGAACTGCTCAAGAAGATAAAGGAATCATCTGTGTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATCTTGACTCGAATTGATAGTTGCCTGGAGGAAGGAGCAGAAGAGTTTCTGTTGAAACCTGTGAAGTTGTCAGATGTAAAACGCGTGACAGATTTTATCATGAAAGGTGAAGGGAAGAAAGGTCATAAAAGAAGTAGATCAGATGATTACAGCCCTCCATCATCATCATCATCATCTATTTCAACTGCGTTCTCATCAGTTTCTCATTCCTGTGATCTATCTTTGCCTGCATCACCTTCTGCATTGCTCTCAAAGAAAACCAGATTGAGCATATAG 609 0.4499 MAAASDVFRPEVGSGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMKGEGKKGHKRSRSDDYSPPSSSSSSISTAFSSVSHSCDLSLPASPSALLSKKTRLSI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00807 202 SUPERFAMILY CheY-like 16 145 IPR011006 -
Vian4g00807 202 Gene3D - 16 177 - -
Vian4g00807 202 MobiDBLite consensus disorder prediction 148 173 - -
Vian4g00807 202 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 165 IPR045279 GO:0009736
Vian4g00807 202 Pfam Response regulator receiver domain 19 138 IPR001789 GO:0000160
Vian4g00807 202 ProSiteProfiles Response regulatory domain profile. 18 145 IPR001789 GO:0000160
Vian4g00807 202 CDD REC_typeA_ARR 19 140 - -
Vian4g00807 202 SMART REC_2 17 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00807 Vian-Chr4 10581973 10583713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00807 17 148 Response Regulator Gene Family AT5G62920 82.576 2.65e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vian4g00807 Response_reg 7.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00807 K14492 - gmx:100306152 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00807 4 10581973 10583713 Vian4g00807 4 10581973 10583713 ECH