Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00768 ATGAGGGGTGGGAGAAAGAGGAGTATGATAAAGCTTAAGTTTAGCAAGATCTACTCATTTGCTTGTGGTAGAACAACCTTGAGGAGAGAACATTCGCGGATTGGGGGACATGGTCATTCCAGGGTTGTTTTCTGCAATGAACCTGATAGGTTTGAGGTAGGGGTTTTGAATTATGCTGATAATTCTGTTAGGTCCACAAAATACACGGTTGCTACTTTCTTGCCAAAGTCACTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTCTTGGTGGCTGGGATCTTGGCCTTCACAAAGCTTACTCCTTATACTGCTGTCAGTGCTATCCTTCCACTCTCTATCATCATTGGGGCAACTATGGTGAAAGAGGGTATTGAAGACTGGCGCAGGAAAAAGCAGGATATTGAGGTGAACAAGAGAAGAGTTATATTGCATAAAGGTGATGGCATTTTTGAATATACTGAATGGAAGAATCTGAGAGTAGGGAATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCCTCCAGTTATGAGGATGCAGTATGCTATGTTGAGACCATGAACTTGGATGGTGAAACAAATTTGAAATTAAAACAAGGGTTGGATGTAACTTCTTCCTTACAGGAGGACTTCAAAATATGTGATTTTAGAGCTGTCATCAAATGTGAGGACCCAAATGCAAATCTGTATTCTTTTGTTGGGAGCATGGAGTTTGAAGAGCAAAAGTACCCTCTTTCTGCTCAGCAACTTCTTCTAAGAGACTCCAAACTTCGCAATACAGACTATGTGTTTGGAGCCGTCATCTTTACCGGTCATGACACAAAGGTTATTCAAAACTCCACTGATCCTCCTTCAAAAAGAAGCAAAATTGAGAAGAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTGTTGGATCTATTATCTTTGGCATCATAACCAAAGGAGACCTGAAAAATGGGTTGATGAAAAGATGGTATCTAAGACCAGATAGTTCCACAATTTTCTTTGATCCAGAGAGAGCAGCTGCAGCTGCTATATTTCATTCTTTAACAGCCTTAATGTTATATAACTTCTTTATTCCTATCTCTCTGTATTTCTCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGAAGCAGACAAACCAGCTCGTGCCCGTACTTCAAACTTGAATGAGGAACTAGGCCAAGTTGACACAATACTTTCTGATAAAACTGGGACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTGTTGCTGGGGTAGCTTATGGTCATGGTGTAACAGAGGTTGAGCAAGTCACCGGAAGAAGTAACGGTTCACCTATTCTTCATGAGCATATTAATGGTCTAAAATCAAAATCTAATGAAATCGGGGACTCTCGAGATAGAAAAGAGCCTATTAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGGAACTGGGTTAATGAACCTTTTGCTGATGTTATACAAAAGTTTTTTCGCTTATTGGCAATTTGTCATACTGCCATACCAGAAGTGGATGAAGAAACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCTGCAAGTGAAGTTGGTTTTAAATTCTACAAAAGGACCCAGAATTGCTTGTCAACGTATGAGTTGGATCCTGTTTCTGGTAATGAAGTTGAAAGGATTAATTTTCATTGGGAAAGGCACATGCAGGTACCTAGTAACTTGTCATATGATGCTAATGGTTAA 1833 0.3906 MRGGRKRSMIKLKFSKIYSFACGRTTLRREHSRIGGHGHSRVVFCNEPDRFEVGVLNYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLTPYTAVSAILPLSIIIGATMVKEGIEDWRRKKQDIEVNKRRVILHKGDGIFEYTEWKNLRVGNIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQEDFKICDFRAVIKCEDPNANLYSFVGSMEFEEQKYPLSAQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSIIFGIITKGDLKNGLMKRWYLRPDSSTIFFDPERAAAAAIFHSLTALMLYNFFIPISLYFSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGHGVTEVEQVTGRSNGSPILHEHINGLKSKSNEIGDSRDRKEPIKGFNFTDERIMNGNWVNEPFADVIQKFFRLLAICHTAIPEVDEETGNVSYEAESPDEAAFVIAASEVGFKFYKRTQNCLSTYELDPVSGNEVERINFHWERHMQVPSNLSYDANG 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00768 610 Gene3D - 119 289 - -
Vian4g00768 610 Gene3D - 477 603 IPR023299 GO:0000166
Vian4g00768 610 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 41 576 - -
Vian4g00768 610 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Vian4g00768 610 FunFam Phospholipid-transporting ATPase 119 289 - -
Vian4g00768 610 SUPERFAMILY HAD-like 415 464 IPR036412 -
Vian4g00768 610 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 421 IPR023298 -
Vian4g00768 610 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Vian4g00768 610 NCBIfam phospholipid-translocating P-type ATPase 58 575 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vian4g00768 610 SUPERFAMILY Calcium ATPase, transduction domain A 146 286 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00768 Vian-Chr4 9921296 9924310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00768 3 590 Primary Pumps ATPases AT1G68710 71.886 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00768 K01530 - gmx:100798329 1096.65