Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00766 ATGGTGGCCGATGGGTTTGGTAAGGAGTGCTCGCACGTGTACAGTAGTTGCAAGAGGGAGTTCGTGGAGGTTAGGGTGTCAAGGTTAGGGTTACAGAAGCTCAACATCGAGGACATTCACAAGATGACGTGGCAGGACCTTGATGATGAAATTGAGAAATGGATTAAAACCTCCAACGTCGCTCTCAAGATCCTCTTCCCCAGTAAACAGTGTCTCTATGGCCGCACCTTCTTTGGATTCGCCTTCGTATTCTTCAATCTCCTTTGGTCAGATCACTCTGTGCCTTTTCCCCATGTTTTTGGGCTGGGTAAATGGTCACCTAACCTTTCACTGCTTATCCTCCCTTTTGACAAGCTGTATTGGTTTTTGTTAGGAGTTGACTTTAGTGTTATTCTTGGGGGTTCCTTAGCTGATGAAACAGGTGTTTGA 429 0.4615 MVADGFGKECSHVYSSCKREFVEVRVSRLGLQKLNIEDIHKMTWQDLDDEIEKWIKTSNVALKILFPSKQCLYGRTFFGFAFVFFNLLWSDHSVPFPHVFGLGKWSPNLSLLILPFDKLYWFLLGVDFSVILGGSLADETGV 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00766 142 SUPERFAMILY Cullin repeat-like 1 81 IPR016159 -
Vian4g00766 142 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 90 IPR004140 GO:0000145|GO:0006887
Vian4g00766 142 Gene3D Exocyst complex component Exo70 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00766 Vian-Chr4 9890790 9891501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00766 1 81 EXO70 exocyst subunit family AT5G58430 66.667 8.45e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00766 K07195 - gmx:100803694 132.88