Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00764 ATGGTAGATCGTATGGGTAAGAGATCGTCTGGTAAGGGGTCGTCTGGTAAGAAATCGTCTGGCAATGAGTCATCTGACAAAGAGTCATTTGACAAGGAGTTGTCTGGAGTCGTTTGGGGTCGTCTGGTAAGGGATCGTCTAGGTCTAAGGACTCTAATTCTTTCTTATCGTGAACTTGATGAAGAAGAATACAAGGAGTTTGATGAGGACAAGCTCCAAAATGGGGTTCCTGATTGTATCGACAAGCTAGCCCAAGCTAAGATTAAGATTTGGGTTTTGACTGGAGATAAAATGGAGACTGCCATCAATATTGGTTTCTCTTGTCGCTTGCTTAGACAAGGAATGAAACAAATTATAATTCATTTGGATATTCCAGAAATTCAAGCGTTAGAAAAGGTTGGAGACAAGATGGCTGTTGTGAAGTTGCAAGTTGCTCTATGTAATTTGCATTTTGTTGAAGTGTTGCTCGTTCAAGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCATCAATGGTATTGCCACTCAAACTGGATCTCAGCATTCTATAGATTTAGGCCGTGAAGGATGTTCTGATCTGAAAGCTTTAATGGTGTATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAGTGTCTTCTTTTCGTCACTTCCTGTAATTGCCCTTGGGGTCCTTGACCAGGATGTATCTGCCAGGTACTGCCTGAAGTTTCCGATCTTATACCAAGAAGGGGTGCAAAATGTCCTCTTTAGCTGGCGTATAGTACTTAGTTGGATGCTTAATGGATTTATTAATGCCACAATGATATTCTTCTTCTGCACAAAAGCAATTGAGCCTCAGGCCTTTGATGAGGAGGGAAGAACGGCCGGAAGGGATATGCTGGGCGTGACAATGTATACTTGCGTGGTTTGGGTGGTGAACTTGCAGATGGCACTTGCTATACGTTATTTCACCTTGATACAACATATTTTTATCTGGGGTTCCATTGCTTTCTGGTATCTTTTCCTCCTGGCATATGGAGCAATGCCTCCAAAATTTTCTACAAATGTTTATCAAGTCTTCATTGAAACTCTCGCCACATCTCCTTCCTTTTGGGCTGTGACATTCTTTGTGGCGATCTCAACACTTATACCATACTTCACATTCTCAGTAATTCAGATGTGGTTCTTCCCCATGTATCACCAAATGGTACAGTGGATAAGGTATGAGAGGAAGACAAATGCCACTGAATAA 1272 0.4167 MVDRMGKRSSGKGSSGKKSSGNESSDKESFDKELSGVVWGRLVRDRLGLRTLILSYRELDEEEYKEFDEDKLQNGVPDCIDKLAQAKIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLDIPEIQALEKVGDKMAVVKLQVALCNLHFVEVLLVQVFGKITSCTWTLVLPEDVINGIATQTGSQHSIDLGREGCSDLKALMVYASFSGQPAYNDWFLSLYSVFFSSLPVIALGVLDQDVSARYCLKFPILYQEGVQNVLFSWRIVLSWMLNGFINATMIFFFCTKAIEPQAFDEEGRTAGRDMLGVTMYTCVVWVVNLQMALAIRYFTLIQHIFIWGSIAFWYLFLLAYGAMPPKFSTNVYQVFIETLATSPSFWAVTFFVAISTLIPYFTFSVIQMWFFPMYHQMVQWIRYERKTNATE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00764 423 Pfam Phospholipid-translocating P-type ATPase C-terminal 205 404 IPR032630 -
Vian4g00764 423 Gene3D - 68 169 IPR023214 -
Vian4g00764 423 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 69 121 - -
Vian4g00764 423 SUPERFAMILY HAD-like 69 112 IPR036412 -
Vian4g00764 423 MobiDBLite consensus disorder prediction 1 32 - -
Vian4g00764 423 SUPERFAMILY Calcium ATPase, transmembrane domain M 203 404 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00764 Vian-Chr4 9830032 9834903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00764 205 423 Primary Pumps ATPases AT3G25610 68.493 3.17e-107 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00764 K01530 - var:108330208 588.186