Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00755 ATGGAAAACGTTTCGGTTCTTTGTAAGGAAGAGGTTCCGATGGATTTGCCATGGAAGGCCAAAATGGGAGAGAAAGAATGGTACTTTTTCTGTGTGAGAGACAGAAAGTATCCAACCGGTTTGAGGACGAACAGGGCCACTGAAGCAGGATACTGGAAGGCCACAGGGAAAGACAAAGAGATCTTCAGAGGAAAATCTCCTGTGGGAATGAAGAAAACTTTGGTTTTCTACAAAGGAAGGGCACCCAAGGGAGAGAAAACTGATTGGGTCATGCATGAATATAGACTTGAGGGTAAATTCTCTGTCCCCAACCTCCCCAAAACTGCAAAGAACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCGGGTGGGAAGAAGACTCATATTGATGGAATAATGATGATGGACTCTTACGGAAACGAATTGGGTTCATCTGCTTTGCCACCTCTTACTGATTCCTCACCTTCCATTGGCAACACCAAAGCACTGAGTGTGACTGAACAGGTTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCCAAGAGGGATCTTCGATTCCTTCAGCAACATCAACGTCATCAACAACAACAACGCCCTTTATGGGGTTTCTTCAAACCATTCATTCTACTCCACTCAAGGGTTTCAACTTCAGGCTCCACCAACGTTGCCTTCACCCGGTTCTTCAAACCATTACCTCAGATCCTTCTTTAACAACCATGGAAAAGGATCATTCTTGAGGAATGGCTTTGAACCAGAGACGGAAATGGTCAGTGTCTCACAGGAAACAGGTGTTTCTACTGAAGTGAACGCAGAAACCTCTTCAGTTGTGTCAAATCTTGAGATGGGGAATAGACTCTTTGAGAATCGAAACAACCCAATTGGTTCAGCTGCACCAGTGGACCTTGCTAGCTTGTGGAACTACTGA 930 0.4516 MENVSVLCKEEVPMDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSPVGMKKTLVFYKGRAPKGEKTDWVMHEYRLEGKFSVPNLPKTAKNEWVICRVFQKSSGGKKTHIDGIMMMDSYGNELGSSALPPLTDSSPSIGNTKALSVTEQVYVPCFSNPIDVPRGIFDSFSNINVINNNNALYGVSSNHSFYSTQGFQLQAPPTLPSPGSSNHYLRSFFNNHGKGSFLRNGFEPETEMVSVSQETGVSTEVNAETSSVVSNLEMGNRLFENRNNPIGSAAPVDLASLWNY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00755 309 Pfam No apical meristem (NAM) protein 10 96 IPR003441 GO:0003677|GO:0006355
Vian4g00755 309 Gene3D NAC domain 2 125 IPR036093 GO:0003677|GO:0006355
Vian4g00755 309 ProSiteProfiles NAC domain profile. 1 121 IPR003441 GO:0003677|GO:0006355
Vian4g00755 309 SUPERFAMILY NAC domain 13 121 IPR036093 GO:0003677|GO:0006355
Vian4g00755 309 FunFam NAC domain-containing protein 100-like 3 125 - -
Vian4g00755 309 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00755 Vian-Chr4 9677596 9678721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00755 20 309 NAC Transcription Factor Family AT5G61430 56.207 8.00e-105 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian4g00755 NAM 2.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00755 - - gmx:547650 471.085