Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00731 ATGTGGTGCAGGTCTTGTTCTAATAAACAAAAACAAGAAAAATTCCCTAAGAGAATTCGCAAGGCTGAAAGAGAGAAAGAGAAGCGTGAACAGTTGAATGAACTCTTTCTTGGTCTTGCTGCTACACTCGATCTTAAAGAACAGAACAATGGGAAAGCTTCTATATTGAGGGAATCCATCAGATTGCTGAAAGACTTGTTCAGTCAGATCGAGTCCTTGAAAAAGGACAGTGTATCTCTGTTGTCAGAGACTCATTATGTGACCATGGAGAAAAATGAGATGGTGGAGGAGAATTGTGTTCTGAAAAGTCAAATTGAGAAACTTGCAGGTGAAATAGAAGCAAGAGTAGTCCAATGTAGACATAACCTGATGAATCCATTTCCAGAACCAGAAAAGATTACAGAGTTTTCTGGGGAGAATCTGCAATTGTCCAGCACAGAAGGAGCAGTGCAGCAAGGACATGCAGTTTTGGTTGTCCCCATAAGTACTAATCATGGCCCTCATAATGTTGTTGAGCAGATTCCAAAACCCAAATCCACTATTACTAAACCACATCCCAGGTATCCTACTCAAATGGATTCATGGCCACTGCAATTGCTTGCAGAGCAACCAACTTCAAATTAA 624 0.4054 MWCRSCSNKQKQEKFPKRIRKAEREKEKREQLNELFLGLAATLDLKEQNNGKASILRESIRLLKDLFSQIESLKKDSVSLLSETHYVTMEKNEMVEENCVLKSQIEKLAGEIEARVVQCRHNLMNPFPEPEKITEFSGENLQLSSTEGAVQQGHAVLVVPISTNHGPHNVVEQIPKPKSTITKPHPRYPTQMDSWPLQLLAEQPTSN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00731 207 Gene3D - 13 115 IPR036638 GO:0046983
Vian4g00731 207 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 16 66 IPR011598 GO:0046983
Vian4g00731 207 PANTHER TRANSCRIPTION FACTOR BHLH47 4 206 - -
Vian4g00731 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 79 IPR036638 GO:0046983
Vian4g00731 207 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00731 Vian-Chr4 9261257 9262548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00731 11 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 45.370 2.75e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00731 - - gmx:100782436 221.861