Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00717 ATGTCAAACATTCGAAAGCTTATAGGAGTATGTCCACAGTTTGATATACTATGGGATGCACTGTCTGGCCAAGAACACCTCCAACTCTTTGCTACTATTAAAGGCCTGTCCCCCGCTTCCATAAAATCAATTACCCAGACTTCATTAGCAGAGGTGAAACTCACGGATGCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAGCGCCGTCTCAGTGTTGCAATTGCGCTTATTGGTGACCCTAAGTTAGTCATTTTGGATGAACCCACTACTGGTATGGATCCAATAACAAGAAGGCATGTGTGGGACATAATTGAAAATGCAAAAAGAGGGCGTGCCATTGTTCTTACGACTCACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCATAGGAATCATGGCAAAAGGAAGGCTTCGCTGCATTGGCACCTCAATCAGATTGAAATCACGCTTTGGTACTGGTTTTATTGCTAATATCAGCTTCTATGGAAACAATGAACGCAGTCCTACCAATGGTGATGCAATATCTACAGAGCATCGTGAGGAAGTGAAGAAATTCTTTAAGAATTGTTTAGATGTAGAGCCAAAAGAGGAGACCAATAACTTTATAACTTTTGTGATTCCCCATGACAGAGAGGCGCTCCTGACAAATTTCTTTTCAGAGCTCCAAGAGAGAGAAGAAGAATTTGGCATTTCTGACATCCAGCTTGGTCTTACAACTCTCGAAGAAGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAACGCTACAGCTGAAGGGAGGCTAACAACCCTGACCTTAACATCTGGGGAATCTGTGCAGATTCCCGTAGGAGCTAGGTTTGTGGGAATTCCAGGAACAGAATCTACGGAAAACCCAACAGGGTTTATGGTAGAAGTTTACTGGGAGCAAGATGATACTGGGACCCTATGCATTGCTGGCCACTCGCAGAAGGTTCCTATTCCTCCTGGAGTTCAATTATCATCCTCACCTTCTGCAAGAAACCGTATATATTTAAGCCGGGCAGGACCAATTAATGGAATTGTGATTGATCCAAGTCAAGTTAGTCCAGGTGATTTTCAGCGATAA 1101 0.4332 MSNIRKLIGVCPQFDILWDALSGQEHLQLFATIKGLSPASIKSITQTSLAEVKLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFYGNNERSPTNGDAISTEHREEVKKFFKNCLDVEPKEETNNFITFVIPHDREALLTNFFSELQEREEEFGISDIQLGLTTLEEVFLNIARQAELENATAEGRLTTLTLTSGESVQIPVGARFVGIPGTESTENPTGFMVEVYWEQDDTGTLCIAGHSQKVPIPPGVQLSSSPSARNRIYLSRAGPINGIVIDPSQVSPGDFQR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00717 366 Pfam AAA domain, putative AbiEii toxin, Type IV TA system 52 124 IPR003959 GO:0005524|GO:0016887
Vian4g00717 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 145 IPR027417 -
Vian4g00717 366 Gene3D - 1 164 IPR027417 -
Vian4g00717 366 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1 258 IPR026082 GO:0016020|GO:0055085|GO:0140359
Vian4g00717 366 CDD ABC_subfamily_A 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00717 Vian-Chr4 9070015 9072437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00717 52 162 Calmodulin-binding Proteins AT2G36910 26.087 7.21e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00717 - - gmx:100786538 649.047