Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00713 ATGGAGCTCACCGAAGAACAACAACGGCAAGTTGAAGCGAACCGTGCAGCGGCGATCGCAAAACGCAAAGCGTTCTTAGAATCCAGAGCGCAACGAGAAGAACAATCTCATGGTGAAGGAGAAAAGACTACGAACCCCAACCCATGGCATCTTTTCAAGTGCCAAAAGTTCCCTAAACCTCAACCCCCGAAGTTCCTCGCCAGACTCGAAATATGCTCCGCCGATTCCTTCTCCATCACACCCATTCAGCTTCCTCCATTCCCCTTCCCCGGTCACCAGCATTGCCTCTCCACTCTAAACTCCATTCTCTCACATGTGATGCTTTCGCACTTCACGCAGACCACCGGAGGGGTGGAGGTATGCGTGTTCAAGCTCACTGAGTACCACGCTGTGGTCAGACAGTTGAAGGTGGAGGTGGAGGCGCTTCAGGTGGAGGAGATCCCCTGGGCGACGTTCAACGTGGTGGAGCGTCTCTCGCTTTCGGTAGCTGCTGGGCGGTGGACGCCGGTGCGGCCGGAGCACTTGGCCGACGAGGAGGTAGAGCGCCTGATCGCGAAACTCCCAAGGACTCTCCTGGACGTGTTGCTCCCTTTCCAGCATGACGGACTGCGGTTCGCGTTGAGAAGAGGCGCTCGGTGTCTCATTGCCGATGATATGGGCCTCGGGAAAACACTCCAGGCTATTGCTATTGCGGGGTGTTTTCTGGATGAAGGTTCCATACTCGTGGTTTGTCCTGCTGTGTTGCGGTTCACGTGGGCGGAGGAATTGGAGCGCTGGCTTCCTATCTGTTTGCCGGCTGATATACATCTCGGACTATTCAGTTGGTTTGAAGAGGGGAGAAACCGGGAGGAGGGGAAAGAAAGAGAGAGAAGAAGCAGGAAAGATCTGAGTAAATGGAATTGCAGGAATAGGCCATGGCTCTCAATGGCTTTGGATAATCTGTATTTATTTTACAATTCTGCTGCTATTTTCTCTGCAGTTATGTTTTCCTGA 993 0.5317 MELTEEQQRQVEANRAAAIAKRKAFLESRAQREEQSHGEGEKTTNPNPWHLFKCQKFPKPQPPKFLARLEICSADSFSITPIQLPPFPFPGHQHCLSTLNSILSHVMLSHFTQTTGGVEVCVFKLTEYHAVVRQLKVEVEALQVEEIPWATFNVVERLSLSVAAGRWTPVRPEHLADEEVERLIAKLPRTLLDVLLPFQHDGLRFALRRGARCLIADDMGLGKTLQAIAIAGCFLDEGSILVVCPAVLRFTWAEELERWLPICLPADIHLGLFSWFEEGRNREEGKERERRSRKDLSKWNCRNRPWLSMALDNLYLFYNSAAIFSAVMFS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00713 330 MobiDBLite consensus disorder prediction 25 40 - -
Vian4g00713 330 Coils Coil 125 145 - -
Vian4g00713 330 Gene3D - 170 310 IPR038718 -
Vian4g00713 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 263 IPR027417 -
Vian4g00713 330 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 5 279 - -
Vian4g00713 330 MobiDBLite consensus disorder prediction 24 49 - -
Vian4g00713 330 Pfam SNF2-related domain 211 260 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00713 Vian-Chr4 9005052 9007061 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Vian4g00713 SNF2_N 1.8e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00713 K25861 - vum:124822897 528.48