Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00670 ATGGCGCAACGCGGGTGGCCGGAAATGTTGTGCATAGCCACTCTATTGTTATGCGGCGGTTTTGCAACCTCCTTTTCCACGGACCCTCCGTTGCTCCAACAACAAAAGGACCGGGTCGGTACGCTCCCGGGTCAAACCTTCAACGTTAGCTTCGCACACTACGCTGGGTACATCACCGTCGATGAAAATGCTGAGAGAACACTCTTCTACTGGTTCATGGAGGCCCTTGAAGATCCTCATTCCAAGCCCCTTCTTTTATGGCTCAATGGAGGACCTGGTTGTTCATCCATTGCTTACGGACAGTCCGAGGAAATTGGACCCTTTTATATAAATCCAGATGGCAAGACTCTTCATCCCAATCCCTATTCTTGGAACCGAGTTGCCAACGTTCTTTTTCTTGACACTCCTGTTGGGGTTGGATTTTCATATTCAATTAACGGATCCGACCTGCTGAACAATGGCGATAACAGGACAGCTGAGGACAATTTAGCATTTCTGCTGAAATGGTTTGAGCGTTTCCCTCAGTATAGAAGAAACGACTTTTTAATTGTTGGTGAGAGCTATGGAGGGCATTACGTTCCTCAACTTAGCCAAGTTATTGTTAGGTACAACTCAGCTAGTAAAGAAAATGCTATAAATCTGAAAGGTTTCATGGTAGGAAATGCTCTGACGGATGATTATCATGATCAATTAGGGATGTTCGAGTTTATGTGGTCAACTGGTTTGATTTCGGATCAAACATACAAGCTTTTGAACCAACTTTGTGATTTTCAATCAGTTGAACACCCGTCACATGCTTGTGATAAAATTTGGGATATTGCTTATAACGAACTTGGAAATATAGACCCATACAGTCTGTATACACCACCGTGCCATGGCAATGTTAGTCAGCTAAGTGGGCTGGTGAGAAGAAAGAATAGAATTGGTAGACTCGGTCTCAATGCACCATATGATCCATGCACCGAAAGTCACTCCACTGCATACTTCAATCGACCTGAGGTCCAAATAGCTCTTCATGTTGATCTAGATCATAAGCCTGCTACATGGGATACCTGCAGTGATGTGGTAAATTCAAACTGGAAGGATTCTCCAATAACAGTGCTCGATATTTATCATGAACTTATTGACGTGGGTTTGAAGATATGGGTGTTCAGTGGTAATACGGACACGGTGATACCTGTCACGTCTACTCGCTATAGCATAAATGCTCTGAAGCTACCTACCGTGAGTCCTTGGCGTGCATGGTATGATGATGGGGAGGTAGGAGGATGGACCCAAGAATACGATGGCCTTACGTTTGTGGTTGTAAGGGGTGCAGGGCATGAAGTTCCTTTGCATAAACCAAAACTTGCTCTCACACTCTTCCAAAACTTCTTAGCAGGAACATCAATGCCTGATCTTAAGCTTCACAGTGCCTCTTGA 1422 0.4451 MAQRGWPEMLCIATLLLCGGFATSFSTDPPLLQQQKDRVGTLPGQTFNVSFAHYAGYITVDENAERTLFYWFMEALEDPHSKPLLLWLNGGPGCSSIAYGQSEEIGPFYINPDGKTLHPNPYSWNRVANVLFLDTPVGVGFSYSINGSDLLNNGDNRTAEDNLAFLLKWFERFPQYRRNDFLIVGESYGGHYVPQLSQVIVRYNSASKENAINLKGFMVGNALTDDYHDQLGMFEFMWSTGLISDQTYKLLNQLCDFQSVEHPSHACDKIWDIAYNELGNIDPYSLYTPPCHGNVSQLSGLVRRKNRIGRLGLNAPYDPCTESHSTAYFNRPEVQIALHVDLDHKPATWDTCSDVVNSNWKDSPITVLDIYHELIDVGLKIWVFSGNTDTVIPVTSTRYSINALKLPTVSPWRAWYDDGEVGGWTQEYDGLTFVVVRGAGHEVPLHKPKLALTLFQNFLAGTSMPDLKLHSAS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00670 473 FunFam Carboxypeptidase 33 293 - -
Vian4g00670 473 SUPERFAMILY alpha/beta-Hydrolases 39 464 IPR029058 -
Vian4g00670 473 Gene3D alpha/beta hydrolase 33 293 IPR029058 -
Vian4g00670 473 FunFam Carboxypeptidase 367 461 - -
Vian4g00670 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 448 IPR001563 GO:0004185|GO:0006508
Vian4g00670 473 FunFam Carboxypeptidase 317 464 - -
Vian4g00670 473 Gene3D - 320 358 - -
Vian4g00670 473 Gene3D - 367 461 - -
Vian4g00670 473 Pfam Serine carboxypeptidase 43 460 IPR001563 GO:0004185|GO:0006508
Vian4g00670 473 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Vian4g00670 473 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Vian4g00670 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Vian4g00670 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Vian4g00670 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Vian4g00670 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00670 Vian-Chr4 8096109 8101132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00670 347 464 Calmodulin-binding Proteins AT2G22960 24.370 1.22e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00670 K16297 - gmx:100805227 790.801