Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian4g00662 | ATGTACATCAAACAGGTTGTGATCGAAGGTTTTAAGAGTTATCGAGAGCAAATTTCCACAGAGCCTTTCAGCTCTAAAGTGAACTGTGTTGTTGGTGCTAATGGATCTGGGAAGACAAACTTTTTTCATGCCATCCGTTTTGTATTAAGTGATCTCTTTCAAAACCTACGTGGTGAAGATCGACAGGCACTACTCCATGAAGGAGCTGGACACCAAGTTTTATCTGCTTTTGTGGAGATTGTCTTTGATAATTCAGACAACCGTATCCCGGTTGACAAGGAGGAAGTGCGATTGCGTCGGACTATTGGTTTAAAAAAGGATGAGTATTTTCTTGATGGAAAACACATAACGAAAACTGAAGTGATGAACTTGCTGGAGAGTGCTGGGTTCTCCCGTTCAAATCCTTATTATGTTGTACAACAAGGAAAGATAGCATCATTAACCTTGATGAAAGACTCTGAACGACTGGACTTGCTTAAGGAAATAGGTGGTACTAGAGTTTATGAGGAGAGGCGCCGTGAAAGTTTGAAAATAATGCAGGAAACTGGTAACAAAAGAAAGCAAATAATCCAAGTTGTACAGTATTTAGATGAAAGGCTGAAAGAACTAGATGAGGAAAAGGAGGAACTTAGAAAATATCAACAGCTTGACAAACAAAGAAAATCATTAGAATATGCTATTTTTAGCAAAGAAGTTCAAGATGCTCAGCAGAAACTTACAGAGATAGAAGATGTTCGGGCCAAGGTTTCTGAAACATCAGCAAAAATGTATAATGATGTTCTTGATGCCCATGAGAAATCCAAAGATTTAGAGAATACATTAAAAGATGTATCAAAAGAACTTCAAAACTTTAACAAAGAAAAAGAAGCTATTGAAAAGCGACAAACAGTTGCATTAAAGAAGCACACAGAACTTGAGCTTGATGTCAAAGACTTGCAAGAGAAGAACTCTGGAAACATCCGAGCCAAGGAAGATGCTGCAAGACAACTGGAGATACTTGAGAAAGAAATTCAAGATTCAACCATTGAACTGGGCAAAATCATTCCCTTACATGAGGATCAAATTCAGAAAGAAAAAGACATTGCCATGCAAATAATGGAGCGTGAAAAGAAACTCAGTATACTCTATCAAAAGCAAGGTCGAGCTACCCAGTTTTCAAGTAAAGCTGCTCGTGATAAGTGGCTTCAAAAGGAGATTGATGATCTTGAACGAGTGCATTCTTCAAATAAGGGGCAGGAGCAAAAGCTTTTGGATGAAATTGATCGGCTTGAAAAAGAACTGCGTGATTGTGATGAAAACATAAATAAACGTAAATCAGATATTACTGTTTTCGAATCTGGCATTGCTGAGTCCTTTAAAGGGCTTAATCATTTCAAATTGGAGAGAGACAAGTTAAATCTTGAGAGGAAGTCCCTATGGACAAAGGAGAATGAAATTACTGCTGAAATTGATAAGCTGAGTGCAGAAGTTGAGAAGGCTGAAAAGAATCTTGATCATGCAATTCCTGGTGATGTGAGAAGAGGGCTGAATTCAGTTAGGAAGATTTGCAGGGAGTATAATATTTCTGGAGTTCATGGTCCAATTATTGAGTTGCTGAATTGTGATGAAAAGTTTTTCACTGCCGTTGAAGTTACGGCAGGAAACAGCTTATTCCATGTTGTTGTTGAAAATGATGACAAGTCAACCCAGATAATTAGACATCTTAATTCACAGAAAGGTGGTAGAGTTACATTTATTCCGCTTAACAGAGTAAAGGCTCCACGCATCACTTATCCGCAGAGTTCTGATGTCATACCTCTTTTGAAGAAATTGAATTTTAAACATGACTATACTCCTGCATTCAGTCAGGTTTTTGCGAGAACGGTCATCTGCAAAAATCTGGATGTGGCTTCAAGGGTTGCTCGTACTGATGCTCTGGACTGCATCACACTGGATGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTATGATCACCGAAGATCAAGATTAAGGTTTATGAATATCATTACGCAGAATAAAGGCACTATTCGCATTAGAGAGGAGGAATTGGAGAAAGTTAGATTTAATCTACAGGAGATAGACCAAAAGATTAATGAACTTGTTGCTGAGCAGCAGAAGATTGATGCCAAGCGTGCTCATGACAAATCTGAGATAGAACAGCTTAAGCAAGATATTGCTAATGCTAATAAGCAGAAGCAGTTGATTTCTAAAGCACTTACAAAAAAGGAGAAGTCTGTTGGGGATGTCCAGAACCAGATTGAACAGCTTAAGGCTAGTATCGCAACAAAAAATGCTGAGATGGGCACTGAGCTAATTGATCATTTAACACCAGAGGAAAAGAAACTCTTGTCAGATTTGAACCCTGAAATCAAAGACCTTAAAGAGAAGCTTGTTGCTTGCAAGACTGACCGTATTGAGACTGAAGCAAGGAAAGCAGAACTGGATACCAATCTTACTACTAACCTTAGGAGAAGGAAACAAGAGCTGGAGGCTGTAATATCGGCCGTGGATTCTGACTCTCTGGTTGGTGAGGCTGAATCCAAGGGGCAGGAGCTTAGTGATGCTAAAATGTTGGTTGATGACTTAACAGAGCAGCTTAGAAGAGTTGCTGAAAATATAAATGATCGAATGAGGCAAATTAAAAAGATTAAAGATGAATTGAATAAATTGAAGTCTTTGGAGGACGAATATGAAAGGAAACTTCAGGAAGAAGCAAAAGAATTAGAGCAATTGCTGAGTAAAAAAAATACATATGCAGCTAAAGAAGAAGAGTATGCCAAGAAAATTAGGGAACTGGGACCATTGACATCAGATGCTTTTGAGGCGTATAGACGACGGAATATAAAAGATTTGCACAAAATGCTGCACAGGTGCAATGAGCAATTGCAGCAGTTCAGTCATGTAAACAAGAAAGCACTGGACCAGTATATAAATTTTACAGAACAACGAGAAGAACTTCAGAAAAGACAGGCCGAACTTGATGCAGGAGATGAGAAAATTAGGGAGCTGATATCAGTGCTAGATCAGCGGAAGGACGAATCTATAGAACGCACTTTCAAAGGTGTTGCTAGGCATTTTCGGGAAGTATTTTCTGAACTTGTGCAGGGTGGCCATGGTCATCTGGTTATGATGAAAAAGAAGGATGGTGATCATGATGACGATGAAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAAAAATACATTGGAGTGAAAGTGAAGGTCTCATTTACTGGACAAGGGGAAACACAGTCCATGAAACAGTTGTCTGGGGGTCAAAAAACTGTTGTTGCCCTTACTCTTATCTTTGCCATACAGCGATGTGATCCTGCTCCCTTTTATCTATTTGATGAGATTGATGCAGCTCTGGACCCACAGTACCGAACTGCTGTTGGAAATATGATTCGTCGCTTGGCTGACGTAGCAAACACTCAATTTATCACAACAACATTTCGCCCAGAGCTAGTGAAAGTTGCTGACAAAATATACGGTGTAACACATAAAAACAGGGTCAGTCGTGTTAATGTTGTATCCAAAGAAGATGCATTGGAATTTATTGAGCATGACCAGACGCACAATGCTGAATAA | 3612 | 0.3929 | MYIKQVVIEGFKSYREQISTEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRGEDRQALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYAIFSKEVQDAQQKLTEIEDVRAKVSETSAKMYNDVLDAHEKSKDLENTLKDVSKELQNFNKEKEAIEKRQTVALKKHTELELDVKDLQEKNSGNIRAKEDAARQLEILEKEIQDSTIELGKIIPLHEDQIQKEKDIAMQIMEREKKLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVHSSNKGQEQKLLDEIDRLEKELRDCDENINKRKSDITVFESGIAESFKGLNHFKLERDKLNLERKSLWTKENEITAEIDKLSAEVEKAEKNLDHAIPGDVRRGLNSVRKICREYNISGVHGPIIELLNCDEKFFTAVEVTAGNSLFHVVVENDDKSTQIIRHLNSQKGGRVTFIPLNRVKAPRITYPQSSDVIPLLKKLNFKHDYTPAFSQVFARTVICKNLDVASRVARTDALDCITLDGDQVSKKGSMTGGFYDHRRSRLRFMNIITQNKGTIRIREEELEKVRFNLQEIDQKINELVAEQQKIDAKRAHDKSEIEQLKQDIANANKQKQLISKALTKKEKSVGDVQNQIEQLKASIATKNAEMGTELIDHLTPEEKKLLSDLNPEIKDLKEKLVACKTDRIETEARKAELDTNLTTNLRRRKQELEAVISAVDSDSLVGEAESKGQELSDAKMLVDDLTEQLRRVAENINDRMRQIKKIKDELNKLKSLEDEYERKLQEEAKELEQLLSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHDDDEDEDGPREANPEGRVEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMIRRLADVANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALEFIEHDQTHNAE | 1203 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian4g00662 | 1203 | Coils | Coil | 225 | 252 | - | - | |
| Vian4g00662 | 1203 | SMART | SMC_hinge_2 | 522 | 634 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
| Vian4g00662 | 1203 | Coils | Coil | 186 | 216 | - | - | |
| Vian4g00662 | 1203 | Gene3D | - | 683 | 841 | - | - | |
| Vian4g00662 | 1203 | Gene3D | - | 594 | 659 | - | - | |
| Vian4g00662 | 1203 | Gene3D | - | 986 | 1195 | IPR027417 | - | |
| Vian4g00662 | 1203 | Coils | Coil | 687 | 770 | - | - | |
| Vian4g00662 | 1203 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 1195 | IPR027417 | - | |
| Vian4g00662 | 1203 | FunFam | Structural maintenance of chromosomes 3 | 985 | 1195 | - | - | |
| Vian4g00662 | 1203 | Pfam | RecF/RecN/SMC N terminal domain | 2 | 1179 | IPR003395 | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian4g00662 | K06669 | - | gmx:100779503 | 2156.33 |
Showing 1 to 1 of 1 entries