Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00659 ATGGAGAATCTTGAGATCCACTTCTTCCCACTTAGAACACCCTTATATAAGGCCAGCTCAAAACCGGGTTTTACTCCTCTTCCTGCCCAAACGCAGAGGCCACGGTTCGGCTCTTCTGCAGAGAGGAATGCGTTACCTAACACTGGTCTAAGAGGTTTTGAAGTGATTGAGGATGCAAAATCACAACTTGAGGCCAAGTCTACAGGAAGAAGAGATGGGAGGGTTTTACCTTTCAGAAACGGGAGGCCCCTGGCGTCTTCGGGCAGCAGTGACACGTGGCGGCTGGCGTGGTTGGGGTTGGAGGAAGTGAAGAGGCTGCTGGGCGCGAACCTGAGCGCGGACTCGTTCGTGTATTTGGGGTACGACGCGGACGAGGATTCGGTGTATTGGGCGATCGACTTGTCAAGGGAGAGTAGTTTGGTGGCTGAATTTGGTGCCATGAAGCTCTGCTTTGTCGAGCTGAGAACGCTCATGGTTGCTACCGACTGGGTCGATTTGAAGGCCATGGGGAGCTTGGCCATTGCCGGTCATGCCAGGGCACTTCTTGAATGGTATAATATATCACGATTTTGTGGACATTGTGGAGAGAAAACAGTGCCAATGGAAGCTGGGAGGCGGAAACAATGTTCAAATGAATCATGCAAAAAGAGGATATATCCACGAGTTGACCCGGTGGTCATTATGCTAGTAATTGATTCAGACAATGATCGTGCCCTTTTGAGCAAACAATCAAGATTTGTACCTAGAATGTGGAGCTGCTTGGCAGGTTTTATAGAGCCAGGAGAAAGCTTAGAAGAGGCTGTAAGAAGAGAAACATGGGAGGAAGTTGGTATTGAAGTGGGAGAAGTTGTATATCATAGTTCTCAACCATGGCCTGTTGGACCAAATAGCATGCCATGTCAGCTGATGGTAGGGTTCTTTGCATATGCAAAATCCCTTGAAATAAATGTGGACAAAGAAGAGTTGGAAGATGCTCAGTGGCATAGTAGAGAAGAAGTAAGAAGAGCTCTGACATTTACTGAATACAAGAAAGCCCAACAAACTGCAGCAGCAAAGGTAGAACAAATGTGTAAGGGAGTAGAAAAGACTCACAGCTTGTCTACAGAGTTCAATGTGGAAAGTGGTGAACTTGCTCCAATGTTTGTTCCTGGACCCTTTGCAATAGCACATCACCTTATATCCTCCTGGGCATTCCCAGATAAAGATATAAATGGCATTGAATGCCGTTCAAAACAACCTAGTGGCTCTATGTCAAATTTGTAA 1263 0.4671 MENLEIHFFPLRTPLYKASSKPGFTPLPAQTQRPRFGSSAERNALPNTGLRGFEVIEDAKSQLEAKSTGRRDGRVLPFRNGRPLASSGSSDTWRLAWLGLEEVKRLLGANLSADSFVYLGYDADEDSVYWAIDLSRESSLVAEFGAMKLCFVELRTLMVATDWVDLKAMGSLAIAGHARALLEWYNISRFCGHCGEKTVPMEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDSDNDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEEVGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEELEDAQWHSREEVRRALTFTEYKKAQQTAAAKVEQMCKGVEKTHSLSTEFNVESGELAPMFVPGPFAIAHHLISSWAFPDKDINGIECRSKQPSGSMSNL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00659 420 PANTHER NUDIX HYDROLASE, NUDC SUBFAMILY 57 398 - -
Vian4g00659 420 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 221 365 - -
Vian4g00659 420 Pfam NADH pyrophosphatase zinc ribbon domain 188 219 IPR015376 GO:0016787|GO:0046872
Vian4g00659 420 Gene3D - 52 220 - -
Vian4g00659 420 ProSitePatterns Nudix box signature. 256 277 IPR020084 GO:0016787
Vian4g00659 420 FunFam Nudix hydrolase 19, chloroplastic 221 400 - -
Vian4g00659 420 FunFam Nudix hydrolase 19, chloroplastic 86 220 - -
Vian4g00659 420 Pfam NUDIX domain 225 336 IPR000086 -
Vian4g00659 420 Pfam NADH pyrophosphatase-like rudimentary NUDIX domain 73 184 IPR015375 GO:0016787
Vian4g00659 420 SUPERFAMILY Nudix 172 348 IPR015797 -
Vian4g00659 420 CDD NADH_pyrophosphatase 224 397 - -
Vian4g00659 420 PRINTS NUDIX hydrolase family signature 265 280 IPR020476 -
Vian4g00659 420 PRINTS NUDIX hydrolase family signature 251 265 IPR020476 -
Vian4g00659 420 ProSiteProfiles Nudix hydrolase domain profile. 220 350 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00659 Vian-Chr4 7916716 7926653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00659 37 69 Peroxidase AT2G41480 66.667 5.43e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00659 K03426 - gmx:100780473 619.387