Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00653 ATGTTGAACACAACTAAAGAACCAATTCCCAGAATACTGTACGACATGATGAGACAACCTCAGGGACCGTTGAAACAAGAAATCATCGCCAACGAATCCTCTAAGTTTGATTCCCGAGAACCCAATAAATCTTCCATCGATGCAAAGTCACCGATCTCCAACCCCCAAAATTCGAGCTCTTCTGCCATGCCCATGTCGCTGTTGCACGAGGATGAGAATCCTTCGAGCTTGAACGTTCGGAGCAGTCCCATTTCGTCAATGACGAAGGCTGAGAGCGATCAACACTTCGAAGTCGTAATCAAGAAGGTCTTGTTTTCAGAAAATAAACTCTGCGAGAAAGTCCTGGGCGATTTCATGGAGGGTCTAGTTTGGCCAGAATGCTTCATCAAAATCTCCGACAAGATCTTGGTCGTGTTCTTCCGCTTCGGAGAAGGCGGGGCCCGAAGCAGGAAAGAGCCCCAGAAGCTCTTCAAACTATTGGAAGTATTTGAATCCCTAGAAAAACTCAAACCCCATATATCACAAATCTTCGAAGGAGAACCTGGCGCAGACATATGCACGCGGTTCCGTGAGTTGGAGAAGCTCATAATCGATGCTTCGAGTAAAGTCTTATGGGAATTCGAACTCCAAATAGAAGGCAACATCGACGGTCTCCCCCCTCCGCAAGATGGTTCCAACGGTGCGGTGTCGCACTCGGTGGAGATCAACGACTGCGATGACGTGGAAGTGTATGTGGAAGCTGTGATTTTGATGCACTACGAGGATCTCAAGACCAAGTTGTGTTCCATGGGCGATGGGGTTCCTAAAGTTTTGAGTTTGCTCAAGGTTTCTAAAGTTTTGAGCTTGCTCAGGTATAGACAACAATCATGTTTGATCTTAGGGGTTGCATCATGCCTAGAATATTTGGAATCTATTCCATGGAGTGAGAATGAATAA 936 0.4626 MLNTTKEPIPRILYDMMRQPQGPLKQEIIANESSKFDSREPNKSSIDAKSPISNPQNSSSSAMPMSLLHEDENPSSLNVRSSPISSMTKAESDQHFEVVIKKVLFSENKLCEKVLGDFMEGLVWPECFIKISDKILVVFFRFGEGGARSRKEPQKLFKLLEVFESLEKLKPHISQIFEGEPGADICTRFRELEKLIIDASSKVLWEFELQIEGNIDGLPPPQDGSNGAVSHSVEINDCDDVEVYVEAVILMHYEDLKTKLCSMGDGVPKVLSLLKVSKVLSLLRYRQQSCLILGVASCLEYLESIPWSENE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00653 311 PANTHER EXOCYST COMPLEX PROTEIN EXO70 92 217 IPR004140 GO:0000145|GO:0006887
Vian4g00653 311 SUPERFAMILY Cullin repeat-like 98 224 IPR016159 -
Vian4g00653 311 MobiDBLite consensus disorder prediction 18 88 - -
Vian4g00653 311 Pfam Exo70 exocyst complex subunit 94 225 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian4g00653 311 Gene3D Exocyst complex component Exo70 65 233 - -
Vian4g00653 311 MobiDBLite consensus disorder prediction 45 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00653 Vian-Chr4 7878161 7880392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00653 90 225 EXO70 exocyst subunit family AT4G31540 36.957 6.99e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00653 - - gmx:100800141 233.802