Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00647 ATGAGCCACCGCAAGGTGGAATCACCGTCGGCGTTGCCTCTGCTTCGAAGCAGCGAAAGAGATGACGGCTCATGGTCCGGATCCGGGTCAGGGTCAGGGTCAAAGGCATCGCTTAGTGGTTCTGTGTTCAATTTATCTACAACGATCATCGGTGCTGGGATCATGGCCTTGCCGGCGGCCATGAAAGTTGTGGGTGTGAGTGTGGGCGTTGGTGCCATCATCTTCCTGGCCTTCCTCACGCACACCTCTCTCGAGATTCTTCTCAGATTCAGCAGAGCCGCCAAGGCCGCCACCTACGCCCACCTCATGGGGGATGCTTTTGGGAGCTCCGGAACCCTGCTCTTTCACGTGGCGGTGCTTCTCAACAACTTTGGGATACTTGTTGTTTACGTCATCATAATTGGTGATGTCTTGTCTGGAACATCTTCCAGTGGAGTCCATCATTTCGGGGTGCTTGAAGGCTGGTTCGGCCAGTGCTTCTGGACAACCCGTACTTTCGTTCTGCTTCTCGCAACTCTCTTCGTATTTGCTCCATTGGCCTTCTTTAAGAGGATAGATTCGTTGAGACATAGTTCTGCTTTAGCAGTGGCTCTGGCCATTGTGTTTCTACTCATAACTGCGGGAATCACGTTCTTCAAATTGTTTAATGGCAGCATAGCCAGTCCCAGGATGCTTCCTAATATTACTGATGTTTCATCCATATGGAATCTCTTTACTGCCGTTCCAGTTCTTGTGACGGCATTTGTTTGTCACTACAATGTGCATACAATCGAAAATGAATTAGGAGACCCTTCCTTGATGCAACCGGTTATACGTGCATCACTGGTTCTGTGTTCTAGTATTTATATTCTTACAGCATTATTTGGAGTTCTCCTATTTGGTGAGTCAACACTTGATGATGTGCTGGCCAACTTTGATACTGATCTGGGTATCCCTTATAGCAGTCTACTCAATGACATTGTTCGTATCAGCTACGCCCTCCACCTCATGCTTGTTTTCCCAGTTATCTTCTTCTCATTGCGCTTCAATTTGGACGATCTCATCTTTCCTTCAGCTAGGTCCTTGGATTTAGATCATCGTAGGTTTGTCTTGATCACCATTGGACTCATCACTTTAATATATGTGGCTGCAAATTTTTTACCTACTATCTGGGATGTGTTTCAATTCACTGGAGCTACTGCCACCGTTTGCCTTGGGTTTATTTTCCCTGCTGCAATTTCTATCAGGGATCCTCATGGGATTTCAACAAAGAAGGACAAGGTTTTATCCATTGTCATGATTTTTCTTGCTGTGTTCTCAAATGTGGTGGCTATATACAGTAATGCTGAATCTTTGTTCGGAAAACGTGTGGATCCTCAGCAATGA 1365 0.463 MSHRKVESPSALPLLRSSERDDGSWSGSGSGSGSKASLSGSVFNLSTTIIGAGIMALPAAMKVVGVSVGVGAIIFLAFLTHTSLEILLRFSRAAKAATYAHLMGDAFGSSGTLLFHVAVLLNNFGILVVYVIIIGDVLSGTSSSGVHHFGVLEGWFGQCFWTTRTFVLLLATLFVFAPLAFFKRIDSLRHSSALAVALAIVFLLITAGITFFKLFNGSIASPRMLPNITDVSSIWNLFTAVPVLVTAFVCHYNVHTIENELGDPSLMQPVIRASLVLCSSIYILTALFGVLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRISYALHLMLVFPVIFFSLRFNLDDLIFPSARSLDLDHRRFVLITIGLITLIYVAANFLPTIWDVFQFTGATATVCLGFIFPAAISIRDPHGISTKKDKVLSIVMIFLAVFSNVVAIYSNAESLFGKRVDPQQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00647 454 MobiDBLite consensus disorder prediction 1 37 - -
Vian4g00647 454 MobiDBLite consensus disorder prediction 21 37 - -
Vian4g00647 454 PANTHER AMINO ACID TRANSPORTER 31 433 - -
Vian4g00647 454 Pfam Transmembrane amino acid transporter protein 36 442 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00647 Vian-Chr4 7814825 7817817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00647 11 454 Amino Acid or Auxin Permease AAAP Family AT3G30390 60.811 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00647 K14207 - gmx:100778699 730.324