Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00629 ATGAAGGCAGATGGGACAAGCGTCCAACAAGGATTCCAAAGTAAAGGGTACGTCATGGGCGGCGTTGATGGTAGCAGTGTTGAATTGCCCGGCTCTTGCGCCATTGCCAACGTCCGCTACTCCACCGCTGGCCACTCCAAGCTCGTGAGCGTCCAACCCTTCGTCGCCGGCTACCGTTTCGGCTCCGTCGCCGTCGCGCACAATGGAAACTTCGTGAACTACCGCTCCAAACTGGAAGACAATGGGTCCATCTTCAACATGACCTCCGACACCGAGGTCGTGCTCCACCTGATTGCCACCTCCAAGCACAGACCTTTCCTACTCAGAGTCGTGAATGCCTGCGAGAATCTGAAGGGGGCGTACTCCCTGGTGTTCCTCACGGAGGACAAGCTGGTGGCTGTGAGGGACCCCTTCGGGTTCCGACCTTTGGTGATGGGAAGGAGAAAGAACGGCGCTATGGTTTTCGCCTCGGAGACATGCGCGCTGGATTTGATCGATGCGACGTATGAGAGAGAGGTGAACCCGAGTGAGGTTGTGGTGGTGGACCACACGGGAATCCAATCCCTCTGCCTCGTGACTCATCAGGAGACAAAGCAATGCATCTTCGAGCACATATACTTCGCACTTCCCAACTATCTTGTCTTCAGGAGGTCTGTGTACGAGTCTAGGAGGAAATTCGGGGAAATACTGACCATTGAGAGCCCCGTTGAGTGCGACGTTGTGATTGCGGTTCCCGATTCTGGGGTGGTGGTTGTGCTTGGCTATGCTGCAAAAGCTAGGGTTCCCTTTCAGCAGGGGTTTATAAGGGTTAGCTCCACAATCCAACCAGACCCATTGGCGGCGACGTTGGTCGCATCCGGAACACTCATCGGCGTCGTCATGGGAGGACGAGCTCCAAATCTGCCGTCGTTGCCGGATTCCGACGAGCCTCATCCAGCAGCGGCGTCAACGTCTGCAAGTATGGATTTGCGTGATTGTCCTTTTGTGTGTAATGAGAATGTCTATGGTTCCAGATTTGAAGAGATGCCCATGAAACGAAAACGGGAACCGAAAAAGATGAAGTATAGATTGAAGCAAAATTGTGATCTTTTTGGGGAAAATGAAAAATGGGTTCGTGGGGAAACTAGAGTTGGAGAAGAAAATTGA 1146 0.5305 MKADGTSVQQGFQSKGYVMGGVDGSSVELPGSCAIANVRYSTAGHSKLVSVQPFVAGYRFGSVAVAHNGNFVNYRSKLEDNGSIFNMTSDTEVVLHLIATSKHRPFLLRVVNACENLKGAYSLVFLTEDKLVAVRDPFGFRPLVMGRRKNGAMVFASETCALDLIDATYEREVNPSEVVVVDHTGIQSLCLVTHQETKQCIFEHIYFALPNYLVFRRSVYESRRKFGEILTIESPVECDVVIAVPDSGVVVVLGYAAKARVPFQQGFIRVSSTIQPDPLAATLVASGTLIGVVMGGRAPNLPSLPDSDEPHPAAASTSASMDLRDCPFVCNENVYGSRFEEMPMKRKREPKKMKYRLKQNCDLFGENEKWVRGETRVGEEN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00629 381 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 27 215 IPR029055 -
Vian4g00629 381 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 1 184 IPR017932 -
Vian4g00629 381 Pfam Glutamine amidotransferase domain 51 162 IPR017932 -
Vian4g00629 381 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 26 275 - -
Vian4g00629 381 SUPERFAMILY PRTase-like 200 270 IPR029057 -
Vian4g00629 381 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 8 243 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00629 Vian-Chr4 7586998 7591819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00629 28 269 PRT Gene Family AT2G16570 75.102 2.15e-128 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00629 K00764 - var:108330186 483.796