Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00620 ATGGCTTCTCCATGGGTTCAAGAGCTCCATATTCATCACTTCACCATTCCTGTAACCATTGATAGAATGTCTTCTGTTATGCCGTCAAGGCCTATTCCTGTTAAACCAGGTGACACTTTATACCTTTCCAATCTCGATGACATGATTGGAGCTCGTGTTTTCACACCTACAGTGTATTTTTATCAGTTACACAGCACTGCCTCTTCCCAAAAACCTGTCACAAAAATACTACAATGTGCTCTCGCTGATGTTTTAGTGCCTTACTACCCTTTATCAGGCAGGCTCAGAGAGACGAAGAATGGTAAACTAGAAGTGTTTTTTGGACCGGAGCAAGGAGCACTCATTGTTGAGGCACGATCTGATGTTGCCTTAACTGAATTAGGAGACCTCACAGCTCCGAACCCGGCTTGGGAGCCTTTGATCTTCAAGTTTCCCAATGAAGAACAATACAAAGTCCTGGAAATGCCACTGGTCATTGCTCAGGTGACCCTTTTCCGATGCGGTGGTTTTAGCCTTGGTTTGAGGCTTTGCCATTGCATCTGTGATGGAATGGGAGCCATGCAATTTCTGGGTGCATGGGCTGCTACTGCAAGAACAGGGATGCCGGTTATAGACCCCGTGCCTTGTTGGGACAGGGAAGTTTTCCGGCCACGTGATCCACCGGTGGTTAAATTTCCTCACTTGGAGTTTATGAGAATTGAAGAGGGCTCCAACCTAACAATGACACTGTGGCAAACCAAACCGGTTCAGAAGTGTTACAGGATCAAGCGCGAGTTCCAGAATCGCGTGAAAGCTCTTGCTCAGCCATATGACGCTGCAGGTTGCACCACTTTTGATGCCATGGCAGCTCATATATGGAGATCATGGGTGAAAGCTCTTGATGTGAGGCCACTAGATTACCAGCTTAGGTTAACGTTTTCGGTGAATGCTCGGCACAAGCTGAGAAACCCAGCACTGAAAGAAGGGTTTTATGGAAATGTGGTGTGTGTTGCATGCACAAGAAGCACTGTCTCTGAGCTTGTGCATGGAGAATTACCCGAGACAACCCTTTTGGTTCGAGAGGCCAGACAGAGTGTGTCCGAGGAGTATTTGAGATCTACAGTGGATTATGTCGAAGTGGATAGGCCAAGACAACTTGAGTTTGGTGGGAAACTAACAATAACTCAATGGACAAGGTTCTCAATATACAAGTGTGCAGATTTTGGGTGGGGTAGGCCACTCTATGCTGGTCCTATAGATTTAACTCCCACACCTCAAGTTTGTGTCTTTCTTCCTGAAGGAGAAGCTGATTGCAGTGATGCTTCTATGATCGTGTGCATATGCTTGCCTGAGTCTGCTGCTCAAAAGTTTACACAAGCTTTGTTGCTCCATTCTGATTTTTGA 1383 0.462 MASPWVQELHIHHFTIPVTIDRMSSVMPSRPIPVKPGDTLYLSNLDDMIGARVFTPTVYFYQLHSTASSQKPVTKILQCALADVLVPYYPLSGRLRETKNGKLEVFFGPEQGALIVEARSDVALTELGDLTAPNPAWEPLIFKFPNEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGMGAMQFLGAWAATARTGMPVIDPVPCWDREVFRPRDPPVVKFPHLEFMRIEEGSNLTMTLWQTKPVQKCYRIKREFQNRVKALAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARHKLRNPALKEGFYGNVVCVACTRSTVSELVHGELPETTLLVREARQSVSEEYLRSTVDYVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCSDASMIVCICLPESAAQKFTQALLLHSDF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00620 460 Gene3D - 15 232 IPR023213 -
Vian4g00620 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 32 450 - -
Vian4g00620 460 Gene3D - 238 454 IPR023213 -
Vian4g00620 460 Pfam Transferase family 17 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00620 Vian-Chr4 7494566 7495948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00620 30 455 Monolignol Biosynthesis Gene Families AT5G48930 30.435 2.08e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00620 K15400 - gmx:100802814 856.67