Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00617 ATGAAGAGAAGGGTTAAGCATTCTAGGAAGATCGGTGCATTCCATCCTCTTGCAAGGGAGTGCAGGGAAAGGGCAAGAGAGAGGGCAAGAGAGAGGACAAGAGAAAAGATGAGAAGTCGTGGCCTGGCTGAAGAATCAAAGCCATGTAGAGAGGAAGAAAATCAAAATCTAATCCAATTGGGTTCTTGGAAACCCTCAGAAACTGGAGAAGAATTTGTTACCAAGAGCCACGGTTTGCATCCTTCCTTGGACGTGATCACTGAGGGTAAAGAACACAGCTACCACGCAAAGGAGCATGATGATGATGATTCTTTGGTTATTTTGAGCAAATGGAGCCCCTCCTTGATCTTCAATAACTATGGATTCTCTCACGAACACCAATTTGCAGAATTTCAGTCCTTGGGAAAGCCATGGGAGGCCTAG 423 0.4539 MKRRVKHSRKIGAFHPLARECRERARERARERTREKMRSRGLAEESKPCREEENQNLIQLGSWKPSETGEEFVTKSHGLHPSLDVITEGKEHSYHAKEHDDDDSLVILSKWSPSLIFNNYGFSHEHQFAEFQSLGKPWEA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00617 140 MobiDBLite consensus disorder prediction 1 63 - -
Vian4g00617 140 ProSiteProfiles R domain profile. 19 36 IPR017888 -
Vian4g00617 140 MobiDBLite consensus disorder prediction 13 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00617 Vian-Chr4 7453796 7454616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00617 - - pvu:PHAVU_009G200600g 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00617 4 7453796 7454616 Vian4g00617 4 7453796 7454616 ECH
Vian4g00617 4 7453796 7454616 Vian1g00901 1 9422979 9424396 ECH
Vian4g00617 4 7453796 7454616 Vian2g00206 2 2055451 2056655 ECH