Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00598 ATGGCAGCAAAACTCCTGCAATCTTTAGCAGATGAAAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTTCAGCTTTTTGATCGTCACCATGCTCTCACGGCTCGCCGCATTGCCCAGAAGAGGCTTCCTTCTGGTAATTCGCACTTCAGTTATGGAAGCTTGGAAAGAGATTCTAATAATATACACCATCGCCAAACAACAACAGATACTAGCAGCTTAAACAAGGGTGTGAATGAAAGGCAGAGAATTTCAACCGAATCATCAAGAGCATCATTCTCTTCTTGTTCATCATCAGTGTCCTCTTTGGACTGCAAGGCTGAAGGAGAGGCTCCATTTGACCGGATTATTTTTCCTGAAACTCCTTCAAGGGATGCAGCCATGAACCAATCAACCATCTCTTCCCATTTTGGATGTAACTCCCTTGACCTGAGGGATGTGGTGAAAGATTCTATGTATAGGGAAGCCCGAGGGCTTTCAGTGAAGACTACAGGCAAAGAAGAATCTGCCATGAAGCACAGGGATTCACCACGTCCTATGCAGTTGCCCAAATCTGTTGATGGATCTTATAGAGGTGGAATAGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCTATCCGAGTCCTTGCTAAACTTAGAGAAGCACCTTGGTATTATGCAGAAACTAAAGAACTTCCAAGATCATCACATGATGTAAAAGATGGACCCTGGCATTCGAACGCAAAGGATGCTTCTTGGTTTGGTAATGAAGGAAAAGAAATAAATCGTTTGTCTTTTGAATCACGAGAGACCATCAAATCCACACCAAAACTAAAAGAGCTTCCTAGACTTTCACTGGATAGTAAGGAAGGTTCATTACGCCCTTACAGTTCTGATTCAGCTACTCACCCATCACGAAACATTTACAGTGGCACACCCACATCAAATGACAAATTCTCTACCCTACAACAGCCTTCAACAATCCCCCGTCGTCCACCTGGTGTTGTGGCAAAACTAATGGGCTTGGAAGCATTACCAGATTCCTCTTTGGCTGGTGACACTCAACCATGTTCAACTGAAACATACTCAGCACAAGATAATAGTCAGTTTCCAAGATCATCAAAACAAGGACTAACCAGGCCACTCCGAGTTTCTCATTCTCCAAAAGTTTCTTTGAAAGACCCAATTTCCCCTCGTCGAAAAAATCCTGATCTAGTTATGAAACCCATCTCAAGTTCAAGGTTTCCCATTGAACCAGCACCATGGAAGCAGCAAGATGGAAATCGAAGCTCCCAGAAACTGAATTTAAGGGGTGTAAAAGCTCCAGCGAGAGCACCAGATAGCTTTCCTTCAGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTCAGAGCATTAAAACAGATACTTGAAGCAATGCAAGAAAAGGGACTATTAGAGAGCAGAAAAGAAGAACAAGCTCCAAATGTTATTGGAAGTCAAAATGACTATGACCAAAGAGCTACCATTCAAGATCAGAATACCAGGTCATTAAGGCAACAAAACTCTCAGAGAAACAATTTTCTACCATCCACAATCAAGGGAACTGAATCAGCAAGGGCTTTTGAATCCCCAATAGTGATAATGAAGCCAGCAAAGCTTGTTGAGAAAACTGCAATTCCTGCTTCTTCAGTCATTCCTATTGGTGGTCTTTCTGTTTCCCAGAAACACCAGAATGCTGGTGTATATTTAGATAATAGAACCAGCACATCTGCTACTCGAGTAGCAAAAGATCAGTCTCCCAGGAACATTCATCGGGATGCTTCTGCCAGTTCCATTGATAAGAAAGCAAATGGTAGTAAGACTACTAGATCTGCACAGTCTCAATCTAGGTCTCAGCAACATCTAAAAGAAAATAGCCAAAGTTCTGTGAAGCACTCAGGAACTGTGAGCCCTAGATTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGATCTCGTCCACCTGCTCCACCATCAGATTCAACCAAACTCAGAAGGCAATCTGGTAAGAAGGCAACAGAGTCAGGTTCACCAGGTGGGAAACAAAGACCCAAAACTCTGAACTCGCGGCATAATGATGAGCAACTGAGTGAGATAAGCAACGAATCAAGAAGTTTAAGTTGCCTGGGGGATGAAATTTCTTTGCAATCAGACAGTTTAACTGTCAACTCAAAGATGGAAGTCGAAGTCACAAGTAGTTTAAAGTCTGTTGAAATTGATGACAGCCAAAGTCCTTCTTTGAAGGCTGTGAAGCAATTGATTTCAGAGACAGCGCCAAAAAAATCAACTCCAAGATTGGATGAGGATGAGTCGGTTGCAGAACTTGGAGGAGATGCTCCGGAACATCCAAGTCCTATCTCAGTTCTTGATGGATCGGTGTATAGAGATGATGTGCCATCCCCAGTAAAGCAGATATCTGAAGATTCAAAAGGTGATGATGCTCAAGAATCCAAAGAAAATGAGATTAAAGATCAATGGAACCCAGCAGAAAGCCTTTCATTTCACAGCATGGGATCAGGAGAGATCAATCGAAAAAAATTACAAAACATAGACCACCTTGTTCAGAAGCTTCGACGGCTGAACTCCAGTCACGATGAAGCTAGAATTGACTACATTGCTTCCCTATGTGAAAACTCAAATCCAGATCACAGATACATCTCTGAAATATTATTAGCTTCAGGCCTCTTACTCAGAGATTTGAGTTCCGAGTTGCTGACATTTCAACTTCACTCTTCGGGTAATCCCATTAACCCTGAGTTATTCCTTGTCTTGGAACAGACCAAGGCAAGTAGTTTGCTTTCAAAAGAAGAAAGCACCCCCGAAAAAGATTCTAACATGAAGCTGAACAAAGAGAAATTTCACAGGAAATTCATCTTTGATTCTGTGAATGAGATTCTTGGTGCCAAATTAGGCTCATCCCTAGAGCCATGGTTTCTGCCTAACAGTAACAGACTCACTAAGAAAACCTTGGGTGCTCAAAAGCTCCTCAAAGAACTATGCTTTGAGATCGAAAAAATTCAAGCCAAGAAGCCAGAATGCTGCTTAGAAGATGAAGATGATGATCTGAAAAGTATGCTGTGTCAAGATGTTATGCTTGGCTCAGAAAGTTGGACAGATTTTCATGGTTATTTACCTGGGATTGTGTTGGATGTTGAGAGACTTATATTCAAAGACTTGGTTGATGAAGTTGTGATTGGTGAATCATCTGGTTTGCGAGTCAAGCCATCAGTTAGGCGCAGGAAGCTATTTGGAAAGTAG 3297 0.4198 MAAKLLQSLADENPDLQKQIGCMTGIFQLFDRHHALTARRIAQKRLPSGNSHFSYGSLERDSNNIHHRQTTTDTSSLNKGVNERQRISTESSRASFSSCSSSVSSLDCKAEGEAPFDRIIFPETPSRDAAMNQSTISSHFGCNSLDLRDVVKDSMYREARGLSVKTTGKEESAMKHRDSPRPMQLPKSVDGSYRGGIDGKQSVPIDLKESIRVLAKLREAPWYYAETKELPRSSHDVKDGPWHSNAKDASWFGNEGKEINRLSFESRETIKSTPKLKELPRLSLDSKEGSLRPYSSDSATHPSRNIYSGTPTSNDKFSTLQQPSTIPRRPPGVVAKLMGLEALPDSSLAGDTQPCSTETYSAQDNSQFPRSSKQGLTRPLRVSHSPKVSLKDPISPRRKNPDLVMKPISSSRFPIEPAPWKQQDGNRSSQKLNLRGVKAPARAPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQAPNVIGSQNDYDQRATIQDQNTRSLRQQNSQRNNFLPSTIKGTESARAFESPIVIMKPAKLVEKTAIPASSVIPIGGLSVSQKHQNAGVYLDNRTSTSATRVAKDQSPRNIHRDASASSIDKKANGSKTTRSAQSQSRSQQHLKENSQSSVKHSGTVSPRLQQKKLELEKRSRPPAPPSDSTKLRRQSGKKATESGSPGGKQRPKTLNSRHNDEQLSEISNESRSLSCLGDEISLQSDSLTVNSKMEVEVTSSLKSVEIDDSQSPSLKAVKQLISETAPKKSTPRLDEDESVAELGGDAPEHPSPISVLDGSVYRDDVPSPVKQISEDSKGDDAQESKENEIKDQWNPAESLSFHSMGSGEINRKKLQNIDHLVQKLRRLNSSHDEARIDYIASLCENSNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGNPINPELFLVLEQTKASSLLSKEESTPEKDSNMKLNKEKFHRKFIFDSVNEILGAKLGSSLEPWFLPNSNRLTKKTLGAQKLLKELCFEIEKIQAKKPECCLEDEDDDLKSMLCQDVMLGSESWTDFHGYLPGIVLDVERLIFKDLVDEVVIGESSGLRVKPSVRRRKLFGK 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00598 1098 MobiDBLite consensus disorder prediction 582 720 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 349 379 - -
Vian4g00598 1098 PANTHER LONGIFOLIA PROTEIN 1 1096 IPR033334 GO:0051513
Vian4g00598 1098 MobiDBLite consensus disorder prediction 814 836 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 164 197 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 229 250 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 345 431 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 68 93 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 229 243 - -
Vian4g00598 1098 Pfam Domain of unknown function (DUF4378) 895 1075 IPR025486 -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 164 183 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 582 598 - -
Vian4g00598 1098 Pfam DUF761-associated sequence motif 329 347 IPR032795 -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 774 789 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 513 532 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 684 698 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 289 326 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 49 93 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 768 836 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 279 330 - -
Vian4g00598 1098 MobiDBLite consensus disorder prediction 613 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00598 Vian-Chr4 7214917 7219756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00598 131 1097 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.023 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00598 - - gmx:100787391 1807.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00598 4 7214917 7219756 Vian4g00598 4 7214917 7219756 ECH