Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00591 ATGGAATCTGACAGTGGTAAACAGCAGCAAAAGGACACATTTGGATGCTTCAAGTTGGTTGCCTTAATTGCTCTATGCTTTGTTTTAGTTTCTCCAGCAGAATCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGATATTTGGCTACTGTGACATTGTTTAACTTCCAATTGTACCGCAATATTATGAATCCTGGGTGGACTCTGGGGTGGACATGGGCAAAGAAAGAAATAATCTGGGCCATGATGGGGGCTCAAGCCACAGAGCAAGGAAACTGTGCCAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGGACCCTCAAGTGGTTGACTTGCTACCTGGAGCTCCTTTCAACATGCAGTTCACCAATTGCTGCAGGGGTGGTGTGCTTACATCTTGGGGACAGAACCCTTCAGGTGCAGTATCTTCATTTCAGATAGGTGTGGGGCTCTCTGGCACCTCCAACAAGACAGTCAAATTGCCTAAGAACTTCAAATTGTTGGGACCTGGACCAGGATATTCTTGTGGCCCTGCTAAGGTTGTTCCATCCACTGCAATCCTCACAGATGATCGAAGGCGAAAAATGCAGGCATTGATGTCTTGGAATGTGACGTGCACTTATTCACAGTTTCTTGCCTCCAAGAACCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAATCACAGGTTGTCCACCTTGTGCTTGTGGGTGCCAGAATAACGATACCTGTGTCACGAGAGACTCAAAGATCCTGCAAGAGAATGTCACCTCAACTCATCGAAAATCAGACATCACACCAAAACCATTGTTACAATGCACACACCACCTATGTCATGTCCGGGTGCACTGGCATTTGAAAGACAACTATCAGGACTATTGGCGTGTCAAGATTGCCATTATCAACTTCAACTATCGATTGAATTTCACCGATTGGTCTCTTGTTGTGCAGCACCCCAATCTCAATAATGTAACCCAAGTCTATAGCTTTGAATACATGCCACTCCTTCCCTATGAATCCATAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTTCAGTCTGAGGTGCTCATGAAGAAGGATAAGAACACATTTACTCTCAAGCAGGGTTGGGCATTTCCTAGAAGGGTCTACTTTAATGGTGATGAATGCATGCTGCCACCTCCTGATTCATATCCTATGTTGCCAAACTCTGCCCACAAACCACCAACAACTATTACATTCATTGCAACCTATGTGGTTTTCACATTATTTTTTCATTTGATTGTAACACATTTTTGA 1371 0.4354 MESDSGKQQQKDTFGCFKLVALIALCFVLVSPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGNCAKFKLKIPHSCKRDPQVVDLLPGAPFNMQFTNCCRGGVLTSWGQNPSGAVSSFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKVVPSTAILTDDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKITGCPPCACGCQNNDTCVTRDSKILQENVTSTHRKSDITPKPLLQCTHHLCHVRVHWHLKDNYQDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESINDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKPPTTITFIATYVVFTLFFHLIVTHF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00591 456 PANTHER PROTEIN COBRA 23 441 IPR006918 GO:0010215|GO:0016020
Vian4g00591 456 PIRSF COBRA 8 454 IPR006918 GO:0010215|GO:0016020
Vian4g00591 456 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00591 Vian-Chr4 7125196 7127485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00591 17 450 COBRA Gene Family AT3G02210 57.208 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00591 - - gmx:100813134 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00591 4 7125196 7127485 Vian4g00591 4 7125196 7127485 ECH