Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00529 ATGAAGCGGTCCACTCCACGTGCCCCCACTCTCTCTCTGTCTCCATTCTTCTTTCCTTCTTTGCTTCTCTTCTCCACCGCCGTTTCCCACTTTCCCGGCAAAAATCTAACTGCACTCCTTCTGCATGCCACCGTGCTTGTTAGTTTTGTCTTCGATTTGCGTGTTTTATTGATTGGCGGTTTTCTTTGTGATTTCGAGTTTTCGGTAGTTATGGCGTTTGAGCAAACCTCTGTTCCTGGCGGCGATGTTGTGCGGCCACTGAATTCAGTAGCGCGGAGTGTAGCGGAAGAGCCTCTCGTTTTGCCGGTGTCTACGGCGGTTCCTGGTGCGGTGCCGATTTTCTGTCCTGCGTCTGTCTCTGATGCTGGCTTGGTTGGAATGGGGTATGGGAATGTGACTTCGGGAGGTGGCGGTGGTGCTGCCACATGGTGTGTTCGCCCCGCTGTGCCAGTTCATAATCACAATCCCTCTGTGAATCCTGCTGTTGGGTTTGTTCATGCTCCTAGTTTTCCCAATAGGGTTGGTGCTGTTGGTGGCAATGCTGTTGATGTTTCGAGTAGTTTTGTGGCTGCTACTCATGGCCAGCGGACTGATCAGGCGAATGAGGAGGGTGGGGATGATTCGATTTCAGGGCGGAAAATGAAGTTGATGTGCAGTTATGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGGATGTTGAGATATGTTGGAGGGCAGACAAGGATCATAAGTGTTAAGAGAGATGTGAGTTTTAATGATTTGGTGCAGAAGATGGTTAGTACATTTGGGCAGCATGTGGTTATCAAATATCAGCTTCCTGATGAGGATCTGGATGCATTGGTTTCGGTTTCCTGCCCTGATGATCTGGAGAATATGATGGAGGAGTATGAGAGGTTGATTGAGAGGTCTCCTGACGGTTCTCCCAAGTTAAGGGTCTTTCTTCTTTCTTCTTCAGAACTTGATCCTTCTGGTGTAGCACAGTTTGTAAATTTGCATGATGGTGGACTGAAATATGTTGAAGCTGTGAATGGAATTGCTGATGGGATTGGTGGCAAACTAACAAGGAAAGCGAGTTATACAAGCGCAGTATCTACCCAGAATTCTGATTTTAGCGGGATAGATGCTCTTGATAGCTTGAATGCTGCTCAAGGGGATGTAAGTGGGGTACCTGTACCTATGCCCAGTTCTTTATCACCTGTGGGGAACGTGGCTGCTTCTCATGATGGTTCCTCAAATTCTGTGGTTCCTGAGCCTGGTACATCTTACACAGAGGCCTCTGCAGTTCCACTGGGCATTCCTGTAAGTAATTCTGGCCCAACTCACATTCCACCTCTCCAGAATGAGGTTGAGTTAGAAAAGTCTGTACCTGTTACTTTTTCTCAGACTCAATTTGGGTTACAACAATCTGGTTTGGAAATTCCACCATCTGCACCTTTGCAAACTTCTTTTGATCATCGCCAGGAGGTTATGAACCATGCAGATTATGTCCAGCTGCCTCCCCATATGGGATTCCTGAATCCTCAATTTCTAGGTAAGCCTGGCTCCATCTACACCCAACATCAATTTCATGATCATACTTCTCGTTTTGGGTCCCATCAGGTAATCCCTGCAATGCAAATGGCCATGACTCAGCCATTTTCTCATGCTGCTTTAAGACCTAGTGTTATTCAACCACAACCATTCATGCAACCTCAGCAAAACCTTTTGGACCAATATAATGATGAAAATGCTTCAGGGCTAAGGATTCACCAGGTTCCTGCTGAACAAAGTTACAAAACATTTCAGGTTCAAGTCCCTTTTGGAGGTAATTATGGCTGGGTCCAGGTTCCTTCTGCAGAGCATGTGATCTTTTCTGATGCATTTGTACCTCAACAACCAATGATGATCCCTGAGAAACTCCAACGAGTGGAGGACTGTTACATGTGTCAGAAAAAGCTGCCTCATGCACATTCAGATCCTGTGGTTCAGGATCAGCGAAATAGCTGTGCTGGTCCAATTTCTGATTCAATCCCAAGTTTCTATAGTCTCCCTACGGAGGACAATTCTAGGGCTCAAGCAACAAATATGGTTTTGGTGTCTGCACCAGTGAAGGATGACAATGTTGAACAAGCAGTTGTGACAAGACCCAAGGTCCATAGCAAATTGGATACTCCAGCTGGAGCAGCTTGTACAGACACAACTGGTCTTTCTCTGGAGCTTGAAAGTGAGACGGCTTTTATACAAAGGCTGGACAGGTCTGATCATCCCAGGAATGCAGTTATCCCGGAAGCAGTTGTAAGAACAGGAGAAAAACAGTTGCCAAGTGATGGGCTGATGGGAACAGCACCGCATTCTTATCGAGATGATATCACCCGCCAGCATATGGTGCCACTTCAAAGCAGGTCTAAAGAGGATGCTCTTGTGAATAAACCTGTTGCTAATGATATACCTTTAGTTGGTGGCACATCTGTTGAAAATTCTGACTGTGTGGTTCAAGAATGTCCAACAGAATATACAAATGAACTTCCTAGCACTACTTCAAAAGCAGATGCCATGGAGAATTGGATAGCACAAGATCTTCTCAAACCTATTGATGGAAGAATAGACAACCTGAAAATAGGTAATCCTGAAAATTTTCTAAATAATGATAAATTTGATTACAGCACTCAACATGTTGCAGAGAAGAAAGGGGTCCCTCTAGATAACAAAATTGGGAAGTCAAAGTTGATCACTGATGCTGATCAAATTAATATGATAGATATTCTTCCTAGTTCTACTGTGGAAATTTCATATGGGAATAATTCCAGGCCAGTGGAATATAATGAGGTTATACAAACCCCTGTTTGGGGCATACCTGGATCAAATCCTCAGCCAAAGAGTGGAAACCATCACAGGGAGGATGCAGTTTTATCTTCAGTTCCTCCATCTGCTAGATTTGGAGAGGTGAAGGATTCTTCAAACTCACTTTTTAGCAATCAAGATCTATGGAATATACACAATTCATACTTTCCACCTCCGAGACCTAACAAAGTTGCATTGAAGAAAGAAACCTATTCAAATATGGATCAACTTGGTGAGAATCTTGGCATCAATGGGGAACAAAATTTAGAAGCTCAATTAGACAATGGCCTCTATCAAACACTCAAACAGAATTTAACTTTGGAAGAAGCTCGATCTGCCGCCAAGGTCTCATCAGAAGACCGACAACTTCAAGCCGTTGCTGAAGGTTTAGCTGCTTCCGTTCTGCACTCAAGCACTTCTTCAAATCTTGATTTGAATGCCAAAGATGTGCCCCATCATGAGGACATTGGCGATGGAGATGTTCAAAATAATCTAATAGATATACAGCATAAAGATAAAATTCAGGATCTCAAAAGCAAGCTCCCAGAGAAATTAAATTTTGGCTTTCCAGCATCAGATGTTGGAGCTTTGCAGATTATAAAAAATTGTGACCTTGAAGAGCTGATAGAGTTGGGTTCTGGGACCTTTGGTACTGTATATCATGGAAAATGGAGGGGCACTGATGTGGCAATAAAGCGGATTAATGATAGGTGTTTTGCAGGAAAGCATTCGGAGCAAGAGCGCCTGAGAGCAGACTTTTGGAATGAGGCAATCAAGCTTGCTGACTTGCATCATCCAAATGTGGTAGCATTCTATGGTGTTGTGCTTGATGGCCCCGGAGGTTCTGTGGCAACAGTGACGGAGTATATGGTTAATGGTTCTCTAAGAAATGCATTGCAGAAGAATGGGAGTATTGGGAGGTTTGGGTTTGAGCAGAGGACGTACTCAGTTGGAGTATCAATGTCTTTTCCTTTACTTTCGTATCCATCTTGTATGGAGTACTGTGCTCCTGTTCGTCTTTATTTTTCAGTATTTCTTACTGTTTTCATTGGTGATCGGTGTTCTGTGAGGAATCTTGACAAGCGCAAGCGGCTGTTGATTGCGATGGATGTGGCCTTTGGCATGGAGTACTTGCATGGAAAAAATATAGTACACTTTGACTTGAAAAGTGACAACTTGCTCGTGAATCTCCGAGATCCACATCGTCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTAAAATGCCAGACTTTAATATCCGGCGGAGTTAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTGAATGGGAGCAGTAGTCTTGTATCGGAGAAGGTTGATGTGTTTTCGTTTGGTATTGTTATGTGGGAACTGCTCACGGGAGAAGAGCCGTATGCTGATTTGCACTATGGGGCCATTATAGGTGGTATAGTAAACAACACTTTAAGACCTCCAGTTCCAGAATCTTGCGATCCAGAATGGAGACTGCTAATGGAGATGTGCTGGTCATCAGAACCATCAGAAAGACCTTCCTTCACTGAGATTGCCAATGGATTACGTTCCATGGCAACCAAGATTTCTCCTAAAGGACAAAATCAACAGCAGCAACCTGCCTCATCGCTGATTTCTTTGCTACCACTACTCTATGAATGGACGTGGGAGCCACCAACAGCTGGGCATGACACAGCATGTACAGTTGGGTTGGCTATATCTTTTCCGTTAGTATTTAATTCTATTATTGTGTCTTGGGTGACGGACATGCCAATTGCCAAGCATCGGCCGAAACCGTCCCTGGTGATTCCAAACTTCATAATGGTTTCCGGTTCACACAATTCTATCTACATAATTAAACTCCCGTCAGCTCCAACCCTCTCAAACTGTTCATTCTCTGAAAATATGGCTGGTTCAGAGGGGAGGCCATTGGTTGAGGCAGTGGAACAGAAGGAAGATTTCTACGAGGAGCAAGAGTCCAGTGGATGTGGGTATGGATGCTTTCGGGGATTTGGGTTGAGTTGGTGCAGGGGAGGCCGTGAAGAAGAGAAAAATGGTGATTCGTGGGTGAGTTGCAAGTTGAGGAATATTAAGGAGTTTACAGAAGTGATTGCAGGTCCCAAGTGGAAAACATTCATTAGAAAGATAAGCGGGTATGGAAAGAAGCAGCAGAAGAACAGATTTCAGTATGACGAACACAGCTATGCTCTCAACTTCAATAGTGGGGCTCAGAGTGAAGATGATGACATGCCTCCCTCTTTCTCAGCTAGATTTACTGCTCCTTTCCCTTCTGCTCGTCGCCAAACCGAACAATGA 5133 0.445 MKRSTPRAPTLSLSPFFFPSLLLFSTAVSHFPGKNLTALLLHATVLVSFVFDLRVLLIGGFLCDFEFSVVMAFEQTSVPGGDVVRPLNSVARSVAEEPLVLPVSTAVPGAVPIFCPASVSDAGLVGMGYGNVTSGGGGGAATWCVRPAVPVHNHNPSVNPAVGFVHAPSFPNRVGAVGGNAVDVSSSFVAATHGQRTDQANEEGGDDSISGRKMKLMCSYGGKILPRPSDGMLRYVGGQTRIISVKRDVSFNDLVQKMVSTFGQHVVIKYQLPDEDLDALVSVSCPDDLENMMEEYERLIERSPDGSPKLRVFLLSSSELDPSGVAQFVNLHDGGLKYVEAVNGIADGIGGKLTRKASYTSAVSTQNSDFSGIDALDSLNAAQGDVSGVPVPMPSSLSPVGNVAASHDGSSNSVVPEPGTSYTEASAVPLGIPVSNSGPTHIPPLQNEVELEKSVPVTFSQTQFGLQQSGLEIPPSAPLQTSFDHRQEVMNHADYVQLPPHMGFLNPQFLGKPGSIYTQHQFHDHTSRFGSHQVIPAMQMAMTQPFSHAALRPSVIQPQPFMQPQQNLLDQYNDENASGLRIHQVPAEQSYKTFQVQVPFGGNYGWVQVPSAEHVIFSDAFVPQQPMMIPEKLQRVEDCYMCQKKLPHAHSDPVVQDQRNSCAGPISDSIPSFYSLPTEDNSRAQATNMVLVSAPVKDDNVEQAVVTRPKVHSKLDTPAGAACTDTTGLSLELESETAFIQRLDRSDHPRNAVIPEAVVRTGEKQLPSDGLMGTAPHSYRDDITRQHMVPLQSRSKEDALVNKPVANDIPLVGGTSVENSDCVVQECPTEYTNELPSTTSKADAMENWIAQDLLKPIDGRIDNLKIGNPENFLNNDKFDYSTQHVAEKKGVPLDNKIGKSKLITDADQINMIDILPSSTVEISYGNNSRPVEYNEVIQTPVWGIPGSNPQPKSGNHHREDAVLSSVPPSARFGEVKDSSNSLFSNQDLWNIHNSYFPPPRPNKVALKKETYSNMDQLGENLGINGEQNLEAQLDNGLYQTLKQNLTLEEARSAAKVSSEDRQLQAVAEGLAASVLHSSTSSNLDLNAKDVPHHEDIGDGDVQNNLIDIQHKDKIQDLKSKLPEKLNFGFPASDVGALQIIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKHSEQERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNGSIGRFGFEQRTYSVGVSMSFPLLSYPSCMEYCAPVRLYFSVFLTVFIGDRCSVRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESCDPEWRLLMEMCWSSEPSERPSFTEIANGLRSMATKISPKGQNQQQQPASSLISLLPLLYEWTWEPPTAGHDTACTVGLAISFPLVFNSIIVSWVTDMPIAKHRPKPSLVIPNFIMVSGSHNSIYIIKLPSAPTLSNCSFSENMAGSEGRPLVEAVEQKEDFYEEQESSGCGYGCFRGFGLSWCRGGREEEKNGDSWVSCKLRNIKEFTEVIAGPKWKTFIRKISGYGKKQQKNRFQYDEHSYALNFNSGAQSEDDDMPPSFSARFTAPFPSARRQTEQ 1710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00529 1710 MobiDBLite consensus disorder prediction 399 420 - -
Vian4g00529 1710 Gene3D Phosphorylase Kinase; domain 1 1139 1233 - -
Vian4g00529 1710 MobiDBLite consensus disorder prediction 397 422 - -
Vian4g00529 1710 CDD STKc_MAP3K-like 1151 1459 - -
Vian4g00529 1710 Pfam PB1 domain 233 313 IPR000270 GO:0005515
Vian4g00529 1710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1323 1335 IPR008271 GO:0004672|GO:0006468
Vian4g00529 1710 SUPERFAMILY CAD & PB1 domains 229 320 - -
Vian4g00529 1710 ProSitePatterns Protein kinases ATP-binding region signature. 1151 1182 IPR017441 GO:0005524
Vian4g00529 1710 SMART serkin_6 1145 1469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g00529 1710 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 233 317 - -
Vian4g00529 1710 ProSiteProfiles Protein kinase domain profile. 1145 1465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g00529 1710 Gene3D Transferase(Phosphotransferase) domain 1 1291 1485 - -
Vian4g00529 1710 PANTHER SERINE-THREONINE PROTEIN KINASE 280 1462 - -
Vian4g00529 1710 Gene3D - 234 317 - -
Vian4g00529 1710 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1292 1477 - -
Vian4g00529 1710 MobiDBLite consensus disorder prediction 1679 1710 - -
Vian4g00529 1710 SMART PB1_new 228 315 IPR000270 GO:0005515
Vian4g00529 1710 SUPERFAMILY Protein kinase-like (PK-like) 1140 1459 IPR011009 -
Vian4g00529 1710 CDD PB1_UP2 217 314 - -
Vian4g00529 1710 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1138 1232 - -
Vian4g00529 1710 Pfam Protein tyrosine and serine/threonine kinase 1150 1459 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00529 Vian-Chr4 6264915 6273451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00529 146 688 MAP Kinase Kinase Kinase AT3G46920 37.838 4.90e-83 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vian4g00529 PK_Tyr_Ser-Thr 5.8e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00529 - - gmx:100776264 2104.33