Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00518 ATGTCCGTCGCTACTTCTCCTCTGCATCAAATACAATTTCTCAAATGTCCTCGCTTTTCTTCCAAATCCCACTTTCGCCCTCGTCGCTTCCACTCCCTAACCCAGAGAACCATTCCTGCAATCTCCGCAGTTGCAGCGGAAACGGAGTTGCATACACAGCAGGATCAATCAGTTGAAGCAGATGTGTTTGCTTGCCCAATATGTTATGAACCATTGATAAGAAAAGGCTCTCCTGGTCTGAATTTATCAGCAATTTATAGATCTGGTTTCATGTGTAAGATATGTAAGAAGTCATACACTAGCAAGGACAGGTATCTGGATTTGACTGTGACTGCTGGATTGAAAGATTACACTGAAATTCAACCAGCTCGGACTGAGCTTTTCAGGAGTCCCCTTGTTTCCTTCTTATATGAAAGAGGATGGCGTCAGAATTTCAGGCAAAGTGGCTTTCCTGGTCCTGATGAAGAGTTCAAAATGGCTCAAGAGTACTTTAAATCTGCTAGAGGTGGACTTCTTGTTGATGTTAGCTGTGGCAGTGGTTTATTTTCCAGAAAATTCGTAAAATCTGGAACCTATTCCGGAGTCGTTGCACTAGATTTCTCTGAAAATATGCTTCGTCAATGTTATGATTTCATTAAGAAAGATGACACACTTTCAACCACTAATATTGCTCTCGTAAGGGCAGATGTTTCTAGGCTTCCCTTCGCATCAGGTTCAGTTGATGCTGTTCATGCTGGTGCAGCTTTGCATTGCTGGCCATCTCCCTCCAATGCTGTTGCTGAAATCACCCGGATACTAAGAAGTGGTGGAGTTTTTGTTGGAAGCACTTTTCTGCGTTACAGTTCATCAACTCCCTGGTTTATACGCCCTTTCAGAGAGAGGACTCCACAAGGCTATGGCTATTTAACAGAGGAAGAGATCAGAGACCTTTGCACTTCGTGTGGTCTTACTAATTACTCAAGCAAGACTCAGCAGGCTTTTATTATGTTTACAGCTCAGAAGCCATAA 1008 0.4306 MSVATSPLHQIQFLKCPRFSSKSHFRPRRFHSLTQRTIPAISAVAAETELHTQQDQSVEADVFACPICYEPLIRKGSPGLNLSAIYRSGFMCKICKKSYTSKDRYLDLTVTAGLKDYTEIQPARTELFRSPLVSFLYERGWRQNFRQSGFPGPDEEFKMAQEYFKSARGGLLVDVSCGSGLFSRKFVKSGTYSGVVALDFSENMLRQCYDFIKKDDTLSTTNIALVRADVSRLPFASGSVDAVHAGAALHCWPSPSNAVAEITRILRSGGVFVGSTFLRYSSSTPWFIRPFRERTPQGYGYLTEEEIRDLCTSCGLTNYSSKTQQAFIMFTAQKP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00518 335 PANTHER METHYLTRANSFERASE 89 320 - -
Vian4g00518 335 CDD AdoMet_MTases 172 273 - -
Vian4g00518 335 Pfam Methyltransferase domain 173 273 IPR013216 GO:0008168
Vian4g00518 335 FunFam Putative methyltransferase, chloroplastic 128 334 - -
Vian4g00518 335 Gene3D Vaccinia Virus protein VP39 128 334 IPR029063 -
Vian4g00518 335 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 331 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00518 Vian-Chr4 6156517 6159778 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vian4g00518 Methyltransf_11 9.5e-20 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00518 - - gmx:100798970 608.601