Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00517 ATGATCATGGGAAACCTTAAACCTGCATGGTTGGAAGCTCTCTATGCACAAAAGTTCTTTGTGGGATGCTCGTATCATGAGAATGCAAAGAAGAATGAGAAGAATATTTGCTGCTTAGATTGTTGCACCAGTATTTGTCCCCACTGCTTACCCTCCCATCGCTTCCATAGGCTTCTGCAGGTTCGCCGTTATGTATATCATGATGTTGTCAGATTGGAAGATCTTCACAAACTCATAGATTGCTCCAACGTCCAGCCTTATACCATCAACAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCACAAAACCGGCAATTCAAGGGGTCAGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTTATCCATTGCTCTCTGGGATGCAAGGTGGATTTTGTGTTGAAACACTACAAGGACCTCTCTTCCTATTTGAGAACATGCAAGTCACTGCAACTAAACTCTGATTTTCTGATTCCACAAGAGATGATGGGTGATGATGAAATGACTCGTTCAACCATTGTGGATTGTGATGAGCCAATGAGTTCATCTTCAGGGTCAGAGAACATGAGCATGGCTTGCACAGAGATTGTAAGGAAGAAGCGTAGTGGGTGGAATGTGTGTGCAAGATCAATGAGCAACAAGGTTTCCCATGAAGACATGGCCACTGGCATGAGCAGAAGGAAAGGCATTCCTCATAGATCTCCTTTGTGTTAG 723 0.4398 MIMGNLKPAWLEALYAQKFFVGCSYHENAKKNEKNICCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLHKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSSYLRTCKSLQLNSDFLIPQEMMGDDEMTRSTIVDCDEPMSSSSGSENMSMACTEIVRKKRSGWNVCARSMSNKVSHEDMATGMSRRKGIPHRSPLC 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00517 240 MobiDBLite consensus disorder prediction 221 240 - -
Vian4g00517 240 Pfam PLATZ transcription factor 62 133 IPR006734 -
Vian4g00517 240 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00517 Vian-Chr4 6143202 6144746 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vian4g00517 PLATZ 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00517 - - gmx:100810461 460.685