Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00491 ATGGAGATCACGAGCAGTATGATGTGGTTTTTCAAAGATAAAGGGTTTGATGACAACAGTGTGCAAGGAATTTTCCGACGGTGTAGGCGCCTTGAGGATGTGCATCAGGAAAGAGCCAGTGAGAATTGGGAGTATTTGAGAAGCATTGGCATTGAAGAAAGAAAGTTGCCCTCAATTGTTTCAAAATGCCCCAAAATTCTTGCGCTGGATCTTTATGACAAGATTATGCCCACGGTTGAATGTCTCAGGACCCTGGGAACAAAACCACGTGAGGTTGCTACTGCCATAGCCAAGTTCCCTCACATACTCTCAAACAGTGTGGAAGAGAAGCTTTGTCCCCTTTTGGCCTTCTTTCAGGCTTTGGGTATTCCTGAAAAGCATATTGGCAAAATGATACTGCTCAATCCTAGGCTTATAAGTTACAGCATTGAAACAAAATTGACTGAAATTGTGAACTTTCTTGCTAGCCTTGGTCTCAATAAAGATGGAATGATTGGAAAAGTTATAGTCAAGGACCCCTATATTATGGGTTATAGTGTTGAGAAAAGACTCCGCCCTACTTCACAGTTCCTCAAATCAATAGGTCTGAGTGAGCAGGATCTTCAAGCAGTGGCTGTGAAGTTCCCAGCAATCTTGAGTAGAGATGTGAACAAGCTTTTGGTACCCAATTATGCGTATCTAAATAGACGAGGATTTCAAGAAAGACAGGTAGTTGCTTTGGTGGTTGGTTTTCCTCCTATATTGATCAAGAGCATTCAGAATTCATTAGAACCAAGGTTCAAATTTTTAGTGGATGTGATGGGAAGACAAGTTGATGAAGTTGTTGATTATCCTTGTTTCTTTCACCATGGCCTCAAGAGAAGAATAGAGCCGCGGTACAAACTTCTAAAGGAGAAGAATTTAAATTGTAGCTTGAGTGAAATGTTGGATTGCAACAAGAAGAAGTTCTTCATGAAGTTTGGTTTGTTAGAAGGACAAGCCTTGAGTAACTAG 993 0.4089 MEITSSMMWFFKDKGFDDNSVQGIFRRCRRLEDVHQERASENWEYLRSIGIEERKLPSIVSKCPKILALDLYDKIMPTVECLRTLGTKPREVATAIAKFPHILSNSVEEKLCPLLAFFQALGIPEKHIGKMILLNPRLISYSIETKLTEIVNFLASLGLNKDGMIGKVIVKDPYIMGYSVEKRLRPTSQFLKSIGLSEQDLQAVAVKFPAILSRDVNKLLVPNYAYLNRRGFQERQVVALVVGFPPILIKSIQNSLEPRFKFLVDVMGRQVDEVVDYPCFFHHGLKRRIEPRYKLLKEKNLNCSLSEMLDCNKKKFFMKFGLLEGQALSN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00491 330 Pfam mTERF 10 118 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 Pfam mTERF 106 316 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 SMART mt_12 238 270 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 SMART mt_12 202 233 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 SMART mt_12 57 88 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 SMART mt_12 166 197 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 SMART mt_12 22 52 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 92 324 - -
Vian4g00491 330 PANTHER CGI-12 PROTEIN-RELATED 127 248 IPR003690 GO:0003690|GO:0006355
Vian4g00491 330 Gene3D Transcription termination factor 3, mitochondrial 91 324 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian4g00491 mTERF 1.5e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00491 K15032 - gmx:100816929 603.594