Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00448 ATGAAGGCAGAGAAACTATCAAGGAGCAGTGAAGTGTCCAATGAGCTTTTGGATTTTTCTGTAAGGACTGCGACTACACATACGCCACAGTTTTTGGGTCTGCCACAGGGAGCATGGTTTCAAGAGGGAGGGTTTGAAACTGCAGGAGAAGGAGTTGTTATTGGGTTTGTTGACACTGGCATAGATCCAACACATCCTAGTTTTGGTGATAGTAAATCTAATCATCCATATCCTGTTCCTGGTCATTATTCTGGCATCTGTGAGGTTACTCGCGACTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCCCGCCACTTTGCTGCTTCAGCCATAACCAGAGGAATATTTAATTCAACTCAGGACTATGCTTCTCCCTTTGATGGTGATGGTCATGGCACGCATACAGCAGCTGTTGCAGCAGGAAACCATGGGATTCCAGTCATTGTTGCTGGACATCACTTTGGAAATGCTAGTGGGATGGCTCCTCGTTCACAGTAA 504 0.4603 MKAEKLSRSSEVSNELLDFSVRTATTHTPQFLGLPQGAWFQEGGFETAGEGVVIGFVDTGIDPTHPSFGDSKSNHPYPVPGHYSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTAAVAAGNHGIPVIVAGHHFGNASGMAPRSQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00448 167 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 166 IPR045051 -
Vian4g00448 167 Pfam Subtilase family 49 163 IPR000209 GO:0006508|GO:0008236
Vian4g00448 167 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 54 65 IPR023827 -
Vian4g00448 167 SUPERFAMILY Subtilisin-like 24 166 IPR036852 GO:0004252|GO:0006508
Vian4g00448 167 Gene3D Peptidase S8/S53 domain 51 166 IPR036852 GO:0004252|GO:0006508
Vian4g00448 167 ProSiteProfiles Serine proteases, subtilase domain profile. 29 167 - -
Vian4g00448 167 PRINTS Subtilisin serine protease family (S8) signature 49 68 IPR015500 -
Vian4g00448 167 PRINTS Subtilisin serine protease family (S8) signature 129 142 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00448 Vian-Chr4 5220173 5221180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00448 2 166 Subtilisin-like Serine Gene Family AT5G44530 75.152 1.99e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00448 - - vum:124835789 327.405