Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00431 ATGGGGAACATTTATCTGGTACATTTGACGGTGGTGGTGGTGGTTTTCCTGGGGGTGTTTTTACCTTGTTTGTGTCAAGGGGATTCAGACGATGATACCACTGCTGTGTATGTTGTTACCCTTAGACATGCTCCTGTTTCTCATTACTATGGTGAGTTGAGAAGAGAAGTTAGTAGCTTCAAAGATGCTGCTCCTGCTCCAGGGAGAACCCAATTTAACAAACCAAGAAGGTATGACAATATTACTAAGACAGATAAGAGATATGGCTCTTACATTTCCCAAGTTCATGATTCTCTGTTGAAGAAAGTGTTAAACGGAGAGAAATATCTGAAGCTCTATAGCTACCATTACCTGATAAATGGATTCGCTGTGCTGGTTACTCAGAAACAGGCAGAGAAACTATCAAGGAGCAGTGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGGACTGCGACTACACATACGCCACAGTTTTTGGGTCTGCCACAGGGAGCATGGTTTCAAGAGGGAGGGTTTGAAACTGCAGGAGAAGGAGTTGTTATTGGGTTTGTTGACACTGGCATAGATCCAACACATCCTAGTTTTGGTGATAGTAAATCTAATCATCCATATCCTGTTCCTGGTCATTTTTCTGGCATCTGTGAGGTTACTCGCGACTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCCCGCCACTTTGCTGCTTCAGCCATAACCAGAGGAATATTTAATTCAACTCAGGACTATGCTTCTCCCTTTGATGGTGATGGTCATGGCACGCATACAGCAGCTGTTGCAGCAGGAAACCATGGGATTCCAGTCATTGTTGCTGGACATCACTTTGGAAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTCGTTGCAGCAATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGCTTGTCAATTACTCCTAATAGACGTCCTCCTGGTGTGGCAACTTTCTTCAATCCAATAGACATGGCTCTGCTGTCGGCTGTGAAGGCCGGTATTTTTGTCGTGCAAGCAGCAGGAAATACTGGACCATCACCAACAAGCATGTTCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCCTCTCATGATCGGGTTTATAGCAACTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGTTGGTCTTGCTCCTGGTACAGATGAAAGGAAACTTTATAAACTGATTCATGCACATCATGCATTGAGCAATAATGACACAACGGTTGCTGATGATATGTATGTTGGTGAGTGCCAAGATGCAAATAAGTTCAACAAGGATTTGATCAAGGGGAACCTCTTAATGTGCAGCTATTCAATTCGATTTGTGCTGGGACTCTCCACCATCAAAAGAGCCTCAGAAACAGCCAAAAATCTTAGTGCAGCTGGTGTTGTCTTCTATATGGATCCCTATGTGATTGGTTTTCAGCTTAACCCTGTTGCAATGAAAATGCCAAGCATAATAATTGCTTCCACTAATGATTCCAAGATTTTAATGCAATACTACAATTCTTCATTGGAAATAGATGCAGTTTCAAAGAAAATTGTTAAATTTGGGGCTGTTGCCAGTATCTGTGGTGGACTAAAAGCGAACTATGGCAGTGCTGCACCCAAGGTAATGTATTACTCTGCCAGAGGACCAGATCCACAAGACAGTCTTCCTCATGAAGCAGACATTTTGAAACCCAACTTGTTAGCTCCTGGAAGTTTTATATGGGCTGCTTGGAGTTCTGTTGCCGCTGATTCCGTTGAGTTCCTAGGTGAGAATTTTGCATTGATGTCTGGCACAAGCATGGCTGCTCCTCATGTTGCTGGTCTTGCTGCACTAATTAAGCAAAAGTTCCCGAGTTTTAGTCCTGCAGCCATTGGATCTGCACTTTCCACTACAGCTTCTCTGTATGACAAGAGTGGTGGGCCAATAATGGCTCAACGATCGTATGCCTCTCCTGAACTAAACGAGTCTCCAGCAACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAAGTGGAGCACTGAATCCTGGTTTGATTTTTGATTCCGGTTATGATGATTATATGTCATTTCTATGTGGCATCAATGGTTCATATCCTGTGGTGCTAAACTACACTGGTCAAAATTGTGGACTCTACAATTCCAGTGTGTATGGTCCTGATCTGAACCTGCCCTCAATCACTATATCAAAGCTGAACCAATCTAGAATAGTGCAGAGGACAGTCCAAAACACTGCTCAAAATGAATCATACAGTGTTGGTTGGACTGCTCCTTATGGAGTTTCATTGAAAGTGTTTCCAACTCACTTCAGTATTGGCAGTGGTGAGAAGCAGATTTTGTCTGTGCTCTTGAATGCAACAGTTAACAGCTCTCTTTCCAGCTTTGGGAGAATTGGGCTGTTTGGGAATCAAGGTCATGTGCTAAACATTCCAATTTCAATCATGGTTAAAATCTCATCTAACACCACTACAAGTTAA 2556 0.4308 MGNIYLVHLTVVVVVFLGVFLPCLCQGDSDDDTTAVYVVTLRHAPVSHYYGELRREVSSFKDAAPAPGRTQFNKPRRYDNITKTDKRYGSYISQVHDSLLKKVLNGEKYLKLYSYHYLINGFAVLVTQKQAEKLSRSSEVSNVVLDFSVRTATTHTPQFLGLPQGAWFQEGGFETAGEGVVIGFVDTGIDPTHPSFGDSKSNHPYPVPGHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTAAVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPTSMFSFSPWIFTVGAASHDRVYSNSIFLGNNVTIPGVGLAPGTDERKLYKLIHAHHALSNNDTTVADDMYVGECQDANKFNKDLIKGNLLMCSYSIRFVLGLSTIKRASETAKNLSAAGVVFYMDPYVIGFQLNPVAMKMPSIIIASTNDSKILMQYYNSSLEIDAVSKKIVKFGAVASICGGLKANYGSAAPKVMYYSARGPDPQDSLPHEADILKPNLLAPGSFIWAAWSSVAADSVEFLGENFALMSGTSMAAPHVAGLAALIKQKFPSFSPAAIGSALSTTASLYDKSGGPIMAQRSYASPELNESPATPFDMGSGFVNASGALNPGLIFDSGYDDYMSFLCGINGSYPVVLNYTGQNCGLYNSSVYGPDLNLPSITISKLNQSRIVQRTVQNTAQNESYSVGWTAPYGVSLKVFPTHFSIGSGEKQILSVLLNATVNSSLSSFGRIGLFGNQGHVLNIPISIMVKISSNTTTS 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00431 851 ProSiteProfiles Serine proteases, subtilase domain profile. 157 701 - -
Vian4g00431 851 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 182 193 IPR023827 -
Vian4g00431 851 CDD PA_subtilisin_like 401 534 - -
Vian4g00431 851 ProSitePatterns Serine proteases, subtilase family, serine active site. 624 634 IPR023828 -
Vian4g00431 851 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 150 IPR037045 -
Vian4g00431 851 SUPERFAMILY Subtilisin-like 152 705 IPR036852 GO:0004252|GO:0006508
Vian4g00431 851 PRINTS Subtilisin serine protease family (S8) signature 257 270 IPR015500 -
Vian4g00431 851 PRINTS Subtilisin serine protease family (S8) signature 623 639 IPR015500 -
Vian4g00431 851 PRINTS Subtilisin serine protease family (S8) signature 177 196 IPR015500 -
Vian4g00431 851 Gene3D Peptidase S8/S53 domain 179 714 IPR036852 GO:0004252|GO:0006508
Vian4g00431 851 Gene3D - 392 561 - -
Vian4g00431 851 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 105 838 IPR045051 -
Vian4g00431 851 Pfam Subtilase family 177 663 IPR000209 GO:0006508|GO:0008236
Vian4g00431 851 CDD Peptidases_S8_3 152 660 IPR034197 -
Vian4g00431 851 Pfam Peptidase inhibitor I9 36 152 IPR010259 -
Vian4g00431 851 Pfam Fibronectin type-III domain 747 840 IPR041469 -
Vian4g00431 851 Gene3D - 718 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00431 Vian-Chr4 4957915 4965358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00431 1 846 Subtilisin-like Serine Gene Family AT4G20430 67.330 0.0 1181