Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00386 ATGTCGAAAGGAGGAAAACTAACCAAGCTGAAGTCAGTGCTCAAGAAATGGAACTCCTTCAGCAGCAAACAGACCCAAGCCACCATCACCTCCGTAGCCAGCGACGGTGACTCCTCGTCGCTCCGCCCCGTGTACGTTGGGAAGACGCGGCGGCAGTACCTGGTGAGCGCGGAGGTTGTCGGACACCCGCTGTTCCGGGAGCTGGTGGACAGGTCCCGCGACAGCAGCTCGGAGGAGGAGGAGGACAGCATCAACGTGGCGTGCGAGGTTGTTCTGTTCGAACACTTGCTCTGGATGCTCCACAACGCCGATCCTCAACCTGAGTCGCTGGACGAACTCGCCGATTTTTACGCCTGCTGA 360 0.5917 MSKGGKLTKLKSVLKKWNSFSSKQTQATITSVASDGDSSSLRPVYVGKTRRQYLVSAEVVGHPLFRELVDRSRDSSSEEEEDSINVACEVVLFEHLLWMLHNADPQPESLDELADFYAC 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00386 119 Pfam Auxin responsive protein 9 100 IPR003676 GO:0009733
Vian4g00386 119 PANTHER EXPRESSED PROTEIN 22 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00386 Vian-Chr4 4389469 4389828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00386 2 100 Calmodulin-binding Proteins AT4G34750 28.846 2.38e-08 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00386 4 4389469 4389828 Vian4g00386 4 4389469 4389828 ECH