Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00355 ATGGCTTCCCTTTTCACCTTCGTTTTGTCCCTCTTGCTTGTGGCACAATGCTGCTGGTGTCTAACATCGCCCAAGAAGACATACATAGTTCACATGAAACAGAACAACAAACCTTCAATCTACCCCACTCACACCGACTGGTACACCGCAAATCTTCAATCTTTAACCACTGATTCCGATCCCTTGCTTTACTCTTATACTCATGCCTACAACGGCTTTGCGGCGTCGCTGGCCGAGGACCAGGCGCAGGAGCTTCTCAGATCCGAGGATGTTCTTGGAGTGTACGAGGAGACAGTCTACCAACTGCACACCACGCGTACGCCGCAGTTTTTGGGGCTCGAGAGAGAGACGGGGCTGTGGGAGGGTCACACCGCGCAGGACCTCAACCAAGCGTCGCACGACGTTATCGTGGGGGTGCTGGACACAGGAGTGTGGCCGGAATCTCCAAGCTTTACTGACGCCGGTATGCCTGAGATTCCGGCACGGTGGCGCGGGGAGTGCGAGACCGGGCCAGATTTCTCGCCGAGTGTGTGCAACAAGAAACTCATCGGTGCGAGAAGCTTCTCGCGAGGGTTCCACATGGCCTCGGGGGTTGGGTCCAGGGAGAAGGAGCCGGCGTCGGCGCGCGACAGGGACGGGCACGGTACCCACACCGCGAGTACAGCGGCTGGGTCGCACGTGGGCAACGCGAGCCTCCTTGGGTACGCCAGCGGGACCGCACGTGGGATGGCACCGACCGCGCGTGTAGCGGTTTACAAAGTCTGCTGGACCGACGGCTGCTTTGCGTCAGACATTCTCGCCGGGATGGACCACGCCATTCAGGACGGCGTCGACGTGCTCTCACTCTCCCTCGGCGGCGGCTCCGCGCCGTACTTTCGCGACACCATTGCTGTAGGCGCGTTCGCAGCGGTGGCAAGGGGGATCTTCGTCTCCTGCTCCGCCGGGAACAGCGGTCCCGAGAAGGCCTCACTTGCAAATGTTGCACCCTGGATAATGACCGTTGGGGCTGGGACGTTGGACCGTGATTTCCCCGCCTTCGCCGTGCTCGGCAACAAAAAACGGTACTCCGGTGTTTCGCTTTACAGCGGAACCGGAATGGGGACCGAACCGGTGGGGTTGGTTTATAATAAAGGGTTGAACCAGTCCGGAAGCGTCTGCATGCCCGGTTCACTTGACCCGAGTTTAGTTCGTGGGAAGGTGGTGGTTTGCGATAGAGGGATTAACGCGCGCGTGGAGAAGGGCAAGGTGGTGCGTGACGCAGGTGGGGTGGGGATGATTCTGGCGAACACAGAAGCGAGTGGGGAGGAGTTAGTAGCAGACAGCCACCTTCTACCGGCTGTGGCGGTGGGAAGAATCGTGGGGGATCAGATCAGGAAATACGCTTCCTCAGATCCTAATCCAACGGCAGTTCTCGGTTTCCGTGGAACGGTTTTGAACGTTAGACCTTCACCAGTGGTGGCAGCGTTTAGTTCAAGAGGGCCCAACATGGTGACCCGACAGATTCTGAAACCGGATGTTATTGGGCCTGGGGTTAACATCTTAGCCGGGTGGTCCGAAGCTATTGGGCCCTCTGGGTTGAGCGATGACACGCGGAAGACGCAGTTCAACATCATGTCAGGTACGTCGATGTCTTGTCCACACATAAGTGGGTTGGCTGCGTTGCTGAAAGCGGCGCATCCAGAATGGAGTCCCAGCGCGATAAAATCTGCACTCATGACCACAGCGTACGTTCACGACAACACCAAGTCCCCACTTCGGGACGCCGCAGGTGGTGCGTTTTCCACGCCGTGGGCTCACGGTGCGGGCCACGTTAACCCACACAGGGCCCTTTCTCCTGGGCTTGTCTACGACGCCTCCACCAGTGACTACATCAAGTTCCTCTGCTCCTTGGACTACACCCCCAACCACATTCAACTCATAGTTAAGCGCCACGCCGTTAATTGCACCAGAAAATTCTCTGACCCTGGCCAATTGAACTACCCCTCCTTCTCCATCCTCTTCGGAGCCAAGAGGGTTGTGAGGTACACGCGCACCCTGACCAACGTGGGCGAGGCTGGCTCCATTTACGATGTCACCGTTGACGCCCCCTCGACGGTGGAGGTGAGGGTGAAGCCCGCCAGGCTTGTATTTGGGAAGGTGGGGGAAAGGCGGAGGTACACGGTGACCTTTGTGTCTAAGAAGAGTGGCGGTAATTCCGGCAAGTATGGTTTCGGAAGCATAATGTGGAGCAACGCGCAGCACCAAGTGAGAAGCCCAGTTGCTTTTTCTTGGACTCTCTTGTGA 2283 0.5777 MASLFTFVLSLLLVAQCCWCLTSPKKTYIVHMKQNNKPSIYPTHTDWYTANLQSLTTDSDPLLYSYTHAYNGFAASLAEDQAQELLRSEDVLGVYEETVYQLHTTRTPQFLGLERETGLWEGHTAQDLNQASHDVIVGVLDTGVWPESPSFTDAGMPEIPARWRGECETGPDFSPSVCNKKLIGARSFSRGFHMASGVGSREKEPASARDRDGHGTHTASTAAGSHVGNASLLGYASGTARGMAPTARVAVYKVCWTDGCFASDILAGMDHAIQDGVDVLSLSLGGGSAPYFRDTIAVGAFAAVARGIFVSCSAGNSGPEKASLANVAPWIMTVGAGTLDRDFPAFAVLGNKKRYSGVSLYSGTGMGTEPVGLVYNKGLNQSGSVCMPGSLDPSLVRGKVVVCDRGINARVEKGKVVRDAGGVGMILANTEASGEELVADSHLLPAVAVGRIVGDQIRKYASSDPNPTAVLGFRGTVLNVRPSPVVAAFSSRGPNMVTRQILKPDVIGPGVNILAGWSEAIGPSGLSDDTRKTQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYVHDNTKSPLRDAAGGAFSTPWAHGAGHVNPHRALSPGLVYDASTSDYIKFLCSLDYTPNHIQLIVKRHAVNCTRKFSDPGQLNYPSFSILFGAKRVVRYTRTLTNVGEAGSIYDVTVDAPSTVEVRVKPARLVFGKVGERRRYTVTFVSKKSGGNSGKYGFGSIMWSNAQHQVRSPVAFSWTLL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00355 760 FunFam Subtilisin-like protease SBT1.5 627 758 - -
Vian4g00355 760 CDD Peptidases_S8_3 100 576 IPR034197 -
Vian4g00355 760 ProSiteProfiles Serine proteases, subtilase domain profile. 110 610 - -
Vian4g00355 760 Pfam Subtilase family 133 579 IPR000209 GO:0006508|GO:0008236
Vian4g00355 760 Pfam Peptidase inhibitor I9 27 103 IPR010259 -
Vian4g00355 760 Pfam Fibronectin type-III domain 657 754 IPR041469 -
Vian4g00355 760 FunFam Subtilisin-like protease SBT1.9 19 103 - -
Vian4g00355 760 SUPERFAMILY Subtilisin-like 102 614 IPR036852 GO:0004252|GO:0006508
Vian4g00355 760 Gene3D Peptidase S8/S53 domain 134 623 IPR036852 GO:0004252|GO:0006508
Vian4g00355 760 Gene3D - 627 757 - -
Vian4g00355 760 FunFam subtilisin-like protease SBT1.5 340 478 - -
Vian4g00355 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 103 IPR037045 -
Vian4g00355 760 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vian4g00355 760 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Vian4g00355 760 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Vian4g00355 760 SUPERFAMILY Protease propeptides/inhibitors 25 101 - -
Vian4g00355 760 CDD PA_subtilisin_like 348 469 - -
Vian4g00355 760 MobiDBLite consensus disorder prediction 195 223 - -
Vian4g00355 760 FunFam Subtilisin-like protease SBT1.5 134 353 - -
Vian4g00355 760 Pfam PA domain 394 457 IPR003137 -
Vian4g00355 760 Gene3D - 340 478 - -
Vian4g00355 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Vian4g00355 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 754 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00355 Vian-Chr4 3986932 3989303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00355 22 757 Subtilisin-like Serine Gene Family AT2G05920 69.377 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00355 - - gmx:100797543 1329.69