Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00350 ATGTCTCCCATGTCAACTATTCCAATTCATAGACCTGAATTTGGGACCTTATTTTTCAATGGGTCTCCAAGCCCTTATAAATGTTTGAGAGTTGCCTCGTCATGGACCATGGCCATGGATTCAAAATTTTCTCCGACAAAGAAGAATAGTATTAATAATGATTATAGTATGAAGAAGAAGGAAGAACTCTCTATGCAGCTTTCAACTCCACCCATTTCCAAAGTGGAAATTTTAAACTCCAACGATCTCCAATTTGATCGGTTGCAGCCATCGGATCAAGAATTGGGTCGAGTAAATAGGTTTGAGTTTGGGCAATTTGTTGCACGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCATGGTTGAGAGCAGAAAGTCACTGGGAGAATCGATCATATGAAAGATATGTTGATAACTTCAAAAGGAAATTTGCTGAGCAGGAATTTCATGCATTAAAGAGACGGTGCAAGGTGCAAAACGGTGATAGCTGCGCATGCATCATCACGGTGAGGAAGGAGCAGAAGAATGCAAAACACTCAATATTAAAAAGTGTTGTAGGAACCCTTGATTTGAACATCCGATATTTGCTTCAAGGGGAGACTTACCCTGGGGAACGGGTAAAGGCTCCCCTTTTTTGCTGCATCAACAGAACACCACCAAGCAGATATGGTTACATTGCAAACTTGTGCGTTATCAAATCAGCTCGGCGCCAGGGAATTGCAAGCAACATGTTGTCATTTGCTATTGGAGCTGCAAAATCTAATGGTGTGACACAGGTATATGTGCATGTGGACAAAAATAATAGTCCTGCACAAATATTGTACCAAAAGATGGGTTTTGAGATGGTTGAAATGGCAAACTCCCAGTTGGTGGAACAAACATACTTACTGCGATTACAGACCTAA 909 0.4125 MSPMSTIPIHRPEFGTLFFNGSPSPYKCLRVASSWTMAMDSKFSPTKKNSINNDYSMKKKEELSMQLSTPPISKVEILNSNDLQFDRLQPSDQELGRVNRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRSYERYVDNFKRKFAEQEFHALKRRCKVQNGDSCACIITVRKEQKNAKHSILKSVVGTLDLNIRYLLQGETYPGERVKAPLFCCINRTPPSRYGYIANLCVIKSARRQGIASNMLSFAIGAAKSNGVTQVYVHVDKNNSPAQILYQKMGFEMVEMANSQLVEQTYLLRLQT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00350 302 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 213 302 IPR000182 GO:0016747
Vian4g00350 302 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 301 - -
Vian4g00350 302 Pfam Acetyltransferase (GNAT) family 148 281 IPR000182 GO:0016747
Vian4g00350 302 CDD NAT_SF 213 264 - -
Vian4g00350 302 Gene3D - 113 296 - -
Vian4g00350 302 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 216 285 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00350 Vian-Chr4 3915059 3917532 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian4g00350 Acetyltransf_1 1.5e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00350 - - gmx:100795426 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00350 4 3915059 3917532 Vian4g00350 4 3915059 3917532 ECH