Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00254 ATGTACTATATCGATCTGGCAGATACAGAAGTCCATTTGGGTATTGATTCCATTAGAAGCATAGTACTTCACTGGCCAGCAATTAAGAAGGAAAGGTTAAGGCCTCATATATTTGCAAAGATGAGCAGACTGCAATTTCTGGAAATTGACGACTTATATCATCATAATTCTGTCGAACCATTTGATATTCTTGGTGATAACACCTGCTGGCCCAAATGGCAAAAGGCTCGGATTGCTGATATTCTTGTTGAAGGACTTCATTTTTTGGCTACTGAGCTGAGATTTCTTTGTTGGTATCACTATCCTCTAGAATCCCTGCCAGAGAATTTTTCTGCAGAAAAACTTGTAATCTTGAGATTGCCACACAGCAGAATGGAAAAACTCTGGCTTGGAGTTAAGAATCTGGTGAATTTAAAAGAACTTGACCTTTCTAAATCCAAGAAGTTAAAGGGGTTGCCAGATTTATCAAAAGCCATAAATCTTGAATTGCTGATTCTCAGGAGTTGTTCCATGTTGACTAGCGTTCACCCATCTATTTTCTCTCTGCCTAAACTTGAGAAGTTAGACCTTGAGAGATGCGAGTCCCTTACAATACTTGCAAGCTGTTCCAATTTACATGGCCTCAGTTATCTCAACCTTGATTTTTGTGAGAATCTAATGAAATTCTCACTGATTTCAGACAATATGAAAGAACTCAGATTGAGATGTTCAAAGATCAAAGCACTTCCTCTATCATTTGGACACCAAAGGAAGCTCGAATTTCTTCATCTGGAAGAAAGTGGCATCGAGAGATTACCTTCTCTGAAAAATCTCACTCAACTTCTACATCTAGATGTAAGCTTTTGTGATAAGCTTCAAACAATAGCTGAGCTTCCACCGTTCCTTGAGAATCTGAATCTCCAATATTGCACTTTACTTCAAACTATACCAAAGCTTCCCTCATCACTCAAAACGCTAAATACTGAAGCCTGCACTTCACTTGAGACTCTACCAGAGCTTCCCACATCCATTGAAATCCTTAATGTTGAATCATGCTCTTCACTTGGGACAATACCAGAGCTTCCTCCATGTCTTCAAACTTTAAACGTCCAATGTTGCCATTTACTTCGAACTATACCAAAGCTTCCCACATGCCTTAAAACTCTACACACCAAAAACTGCACTTCACTTCAGAATCTACCACAACTTCCCCCATTCCTTGAAACTCTAAATGCTACATACTGCAAATCATTGAAAGGTGTTTTGTTTCCTACAGCAAAAGATGAAAAACTAAAGGAAAACATGAAAAAGCTGCTTTTCTGGAATTGCTCAAACTTGGATAAACATTCTCTGGTAGCTATACGGTTGAATATGAAAATCAACATGATGAAATTTGTTGCAAACCATATATCTGCACCGGATCACAGTCATGTTGAAGATTACAGTGATTATGAATATAATTATCATTCTTATCAGGCTGTGTACGCGTATCCAGGAAGCAATTTTCCAGAGTGGTTGGAGTATAAGACAACAGAAGATTATATAATAATTGATGTCCCTTCTAGTATGAGTTCCTCCCTGGTTGGCTTCATTTTCTGCTTTGTCCTTGGCGAGTTTCAACACACAGACATAATCAGAAGAGTTGAATTCAAGATCACTGTAAGTGACGGTGGTGGTAAGGATGAAGGTGAAAGGGAGAGTGTAAGAATGTACATGGATTATTGGGATGACACGATTGAATCGGATAACATATGTGTGATGTACGACCAAAGATGTTCCCACTTCCTACTTAGCAGATCCAGAAGACTAACAAGCTTTAAAATCCAGGTTACAATGGAAGCACGAATCTCCTTTGATGAAACTTTTTATGTAGTGTTGCAGAAGGTTTTAAAAGGATTTGGAGTCAGTCCAATTTCGTTCGACAAATTGCGAAGCTCAAATTATAAGTTTCGTTAA 1935 0.3835 MYYIDLADTEVHLGIDSIRSIVLHWPAIKKERLRPHIFAKMSRLQFLEIDDLYHHNSVEPFDILGDNTCWPKWQKARIADILVEGLHFLATELRFLCWYHYPLESLPENFSAEKLVILRLPHSRMEKLWLGVKNLVNLKELDLSKSKKLKGLPDLSKAINLELLILRSCSMLTSVHPSIFSLPKLEKLDLERCESLTILASCSNLHGLSYLNLDFCENLMKFSLISDNMKELRLRCSKIKALPLSFGHQRKLEFLHLEESGIERLPSLKNLTQLLHLDVSFCDKLQTIAELPPFLENLNLQYCTLLQTIPKLPSSLKTLNTEACTSLETLPELPTSIEILNVESCSSLGTIPELPPCLQTLNVQCCHLLRTIPKLPTCLKTLHTKNCTSLQNLPQLPPFLETLNATYCKSLKGVLFPTAKDEKLKENMKKLLFWNCSNLDKHSLVAIRLNMKINMMKFVANHISAPDHSHVEDYSDYEYNYHSYQAVYAYPGSNFPEWLEYKTTEDYIIIDVPSSMSSSLVGFIFCFVLGEFQHTDIIRRVEFKITVSDGGGKDEGERESVRMYMDYWDDTIESDNICVMYDQRCSHFLLSRSRRLTSFKIQVTMEARISFDETFYVVLQKVLKGFGVSPISFDKLRSSNYKFR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00254 644 Gene3D Ribonuclease Inhibitor 222 294 IPR032675 -
Vian4g00254 644 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 222 IPR044974 GO:0006952
Vian4g00254 644 Gene3D Ribonuclease Inhibitor 17 221 IPR032675 -
Vian4g00254 644 SUPERFAMILY L domain-like 41 409 - -
Vian4g00254 644 Gene3D Ribonuclease Inhibitor 304 466 IPR032675 -
Vian4g00254 644 Pfam Leucine Rich Repeat 114 133 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00254 Vian-Chr4 2681609 2685278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00254 208 466 WRKY Transcription Factor Family AT4G12020 27.742 9.69e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00254 - - vra:106760078 1208.74