Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00243 ATGGAGGGTCAACCTGCTAAACGCAGACGTGTATACTCACTTGAACCCAACAAAGTGGAACAAGCAGCGTTTGCTAGAAACTATATGAACTATTTGGTGCCGGCATTGATCAAGATCAAGGAAAGAAATACCTCTTCAGAACACTGTGATATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGCATTCAGCCCAGGGTTTTGCATGGAGCGATGCTCTAAGTGTGAAGCTTCAGAGGAATAGAGCCAATGCAGATAGTGACAGAACCAGCTTCGGTGACAAGGACAAGGCTGGTGAAGGCTCATCAAGGATTTGTGGCCAAAATGGTGAAATGGTGCCATTGAACAACCGTTTCACTTCAAACCCTAGTTTGAAGCTTAGAAATAAACACAGGAGCATGCCTGAAATGAAAAGGGGTTTGAGAGAAGAAGATGAGGATCAGTTGAAGAGCCTCAGAATGTTGATACCTGGGGGAGAAGAGATGTGTAGTGAACAAATGGTGACTGAGCTACAAAGCTATGTAAGCTGTTTGCAAATGCAGGTGAACATTCTTCAGTGCCTCGCAGAGACACATTGA 585 0.4427 MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALIKIKERNTSSEHCDIQNVVKYEVDMAMVHSAQGFAWSDALSVKLQRNRANADSDRTSFGDKDKAGEGSSRICGQNGEMVPLNNRFTSNPSLKLRNKHRSMPEMKRGLREEDEDQLKSLRMLIPGGEEMCSEQMVTELQSYVSCLQMQVNILQCLAETH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00243 194 MobiDBLite consensus disorder prediction 84 103 - -
Vian4g00243 194 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 192 IPR044660 GO:0006355
Vian4g00243 194 MobiDBLite consensus disorder prediction 83 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00243 Vian-Chr4 2535981 2536565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00243 7 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 50.000 1.18e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00243 - - gmx:100527269 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00626 1 6134617 6135243 Vian4g00243 4 2535981 2536565 PCT