Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00230 ATGGCAGCGACAATTCCTTTCTCTCTGCTGAGGAACTGCTCGCCATTGAAACTGGCAACACCTTTCGCTCGCAGAGGCTCCAACTTTAATCTTCTTCTCCCTCTTCAACCACGCAGATTCGATAAGATCATAAATAAGGAAATACCTTCAAGTATTGTATACGAGGATGAAAAGGTTCTAGCATTTCGAGATATTAATCCGCAGGCTCCAGTTCATGTTCTAGTCATTCCAAAATTTAGAGATGGATTAACACAACTCGGAAAGGCTGATAGTAGACATGGGGAAATATTGGGTCAACTTCTGTATGCTGCAAAAATAGTAGCTGAGAAAGAAGGTATCGTTGATGGATTTCGTGTTGTCATCAACAATGGTCCGAGTGCCTCACCAAGCATTCGACAGCTGTTTCCACCCAAAAATCTTGAGGAAAGAAATGGACTTGACAAATACTCCGTTCAGTCCATCAACCATCAATCTAACACGCCAGAAAACATAGCCCATGGGTTCTATGGTTCAAAACCACTTCTGTTAAAAGATGTGCCTCCTAGCCCCAGAAATTCCACATCTTCTCTTCCTTCCAATGCCATTGAACATACTGTACCTGTACATCAACAAATTGATCCCTCAAGTTCTTCGGAATCCTCCTCAAGTTCATTTCCTGCCTTTCGAGATAAAAGGCCAATGGATCTTCGCGAGTATTTGCCCTTATATAGAGCTGCTTTGAAAGGAGACTGGGAGAAGGCCAATGAGTTCCTAAATTTGCATCCAGGTGCGGAGAATGCCAGGATTTCAAAAGGGATGGAAACAGCTCTTCATATTTCAGCTGGGGCTCGACACACCAAATTTGTGGAGGAACTGGTCAAAAGAATGAGAATTAAGGACCTGGAAATTCAAAACAAAGATAAGAACACTGCACTTTGTTTTGCTGCTGCATCTGGGGTTACCAAGATAGCAAAGCTAATGGTGGAAAGGAATATAAACTTACCTGGAATACGAGGTAGTGAAGGGGTGACACCACTTTATGTAGCCACATTACTGGGCCAAAGGGACATGGTTTGGTATCTCTATTCAGTGACCGATCATGAGATTCTAAAAACAGAAGACTATTTCAGTCTACTGATTGCTGCTATATCAACAGATTTATATGATTTTGCCTTACATATACTGGAGTGTCGACCACAATTAGCGATTTGTCATGGCTTGAATGGGGAGACAGCTTTACATGTGTTGGCAAAAAAGCCTTCATCATTTCGTAGTGGCATTCAACTAGACATCTGGGAAAGATGCATCTATCCATGGATCCGAGTCAAACTAACAACTGAGTACAAATGCCAGTCAAACAACTCGCAATCCCAGGCGCCTTCAACCTTTCAAGACCTACTGGTGACTGGACTCTGTCGTGCAGTAAAATATCTTGTGCCAGGATTTGAAACAGTTCAGAAGAAAAAGATATTGAACTTACAGGCTCTAAAGTTAGTGCAACATCTTTGGGAAGTAATAGAGTCATCAGACGAAATATATGGAGACTTGATTAAAAGCCCTTTGTCAAGGCCCCTATTTATTGCTGCTGAATTTGGAATACCTGAGATTGAGGTGGAAAAGATCATACAGCCTCTATTGAAGGAGATGAAGGATTCTGAAGGTAGGACGCCTCAAATGCTATTTACCGAAGAACACAAGGGGTTGGCCAAAGAAGGAGAAAAATGGCTGAAGAACACTGCTTCATCATGCATGCTAGTTTCAACTCTTATTACCACTGTGATGTTTGCAGCAATCTTTACAGTACCAGGTGGGAACAAGAACAATGGATATCCTATTTTTATGCACACTACATCCTTCAAAGTTTTTGCAGTCTCAGATGCTATTGGATTATTCTCATCAGTAGTATCTATATTGATGTTTTTGTCAATACTCACATCAAGGTATGCACAGGAGGATTTCCTTGTGTCACTGCCTAAAAGGTTGAGTGTTGGCATTGCGACCCTTTTCTTCTCCATCATTACAATGCTCATAGCTTTTGGTGCAACATTTTTCATTGTACTTGGCCATCAATTGGCATGGATTTTCATTCCAATAACCCTAGTTGCATGTATCCCAGCAATATTGTTTGCCTTTTTACAGTTTCCTCTTCTTGTGGATACAATCTCTTGTACATATGGAGTTGGTGTATTTTCTCGTTGA 2178 0.4123 MAATIPFSLLRNCSPLKLATPFARRGSNFNLLLPLQPRRFDKIINKEIPSSIVYEDEKVLAFRDINPQAPVHVLVIPKFRDGLTQLGKADSRHGEILGQLLYAAKIVAEKEGIVDGFRVVINNGPSASPSIRQLFPPKNLEERNGLDKYSVQSINHQSNTPENIAHGFYGSKPLLLKDVPPSPRNSTSSLPSNAIEHTVPVHQQIDPSSSSESSSSSFPAFRDKRPMDLREYLPLYRAALKGDWEKANEFLNLHPGAENARISKGMETALHISAGARHTKFVEELVKRMRIKDLEIQNKDKNTALCFAAASGVTKIAKLMVERNINLPGIRGSEGVTPLYVATLLGQRDMVWYLYSVTDHEILKTEDYFSLLIAAISTDLYDFALHILECRPQLAICHGLNGETALHVLAKKPSSFRSGIQLDIWERCIYPWIRVKLTTEYKCQSNNSQSQAPSTFQDLLVTGLCRAVKYLVPGFETVQKKKILNLQALKLVQHLWEVIESSDEIYGDLIKSPLSRPLFIAAEFGIPEIEVEKIIQPLLKEMKDSEGRTPQMLFTEEHKGLAKEGEKWLKNTASSCMLVSTLITTVMFAAIFTVPGGNKNNGYPIFMHTTSFKVFAVSDAIGLFSSVVSILMFLSILTSRYAQEDFLVSLPKRLSVGIATLFFSIITMLIAFGATFFIVLGHQLAWIFIPITLVACIPAILFAFLQFPLLVDTISCTYGVGVFSR 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00230 725 Pfam Domain of unknown function 566 678 IPR026961 -
Vian4g00230 725 PANTHER CASKIN 263 719 - -
Vian4g00230 725 SUPERFAMILY HIT-like 40 132 IPR036265 -
Vian4g00230 725 MobiDBLite consensus disorder prediction 201 220 - -
Vian4g00230 725 PRINTS Histidine triad family signature 60 78 IPR001310 -
Vian4g00230 725 PRINTS Histidine triad family signature 39 55 IPR001310 -
Vian4g00230 725 MobiDBLite consensus disorder prediction 201 222 - -
Vian4g00230 725 Gene3D - 34 135 IPR036265 -
Vian4g00230 725 Pfam HIT domain 46 134 IPR011146 GO:0003824
Vian4g00230 725 SMART ANK_2a 334 364 IPR002110 GO:0005515
Vian4g00230 725 SMART ANK_2a 367 396 IPR002110 GO:0005515
Vian4g00230 725 SMART ANK_2a 230 259 IPR002110 GO:0005515
Vian4g00230 725 SMART ANK_2a 300 329 IPR002110 GO:0005515
Vian4g00230 725 SMART ANK_2a 265 296 IPR002110 GO:0005515
Vian4g00230 725 ProSiteProfiles HIT domain profile. 39 78 IPR011146 GO:0003824
Vian4g00230 725 SUPERFAMILY Ankyrin repeat 234 410 IPR036770 -
Vian4g00230 725 Gene3D - 222 562 IPR036770 -
Vian4g00230 725 Pfam Ankyrin repeats (3 copies) 235 326 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00230 Vian-Chr4 2364370 2377035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00230 267 697 Miscellaneous Gene Families AT3G12360 25.057 2.58e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00230 - - gmx:100814269 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00230 4 2364370 2377035 Vian4g00230 4 2364370 2377035 ECH