Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00193 ATGATGGGTGAAACTGAGTCTGAGAGTCCCTTAGGTTCACCAACCATGAGCCCTATGAGAACAGCAAAACCATGCAGTAGTCCATCAGAGCACAGCATAAGTTTGATGGTTATTTTGGCAGCCATAGTTTGTGCCTTGCTATGTGCTCTTGGTCTGAACACAATGTTGCAATGTGTGTTCCAATGTGCGAATCGTGTTGTGACGGAACCCTTTCAATGGATTGCCTCAAGGAGACTGAATTCAGGCCTGAAGAAGAGAGAGGTGGTGGCTCTGCCAACCTCCACCTACACTCATTCTGGTGGCTCTCCATGTAACTGTGCGATTTGCTTATCGGAGTTCTCTGATGGAGACAGCATAAGGACCCTCCTTAAGTCTACTCATTCACTACACTCCTTGCATGTTATAGTATCATAG 414 0.4638 MMGETESESPLGSPTMSPMRTAKPCSSPSEHSISLMVILAAIVCALLCALGLNTMLQCVFQCANRVVTEPFQWIASRRLNSGLKKREVVALPTSTYTHSGGSPCNCAICLSEFSDGDSIRTLLKSTHSLHSLHVIVS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00193 137 MobiDBLite consensus disorder prediction 1 25 - -
Vian4g00193 137 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 24 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00193 Vian-Chr4 1764081 1764578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00193 19 130 C3H Transcription Factor Family AT2G17450 36.800 6.11e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00193 - - gmx:100803003 177.563