Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00190 ATGACTAATGAAGATGAACCCAAAAACCACCTCTTGGGCATCATAAATCTCTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGATCCGCGAGATGAGAGAAAAACACCCTCGGAACATAATGGCTACACCACCAGACGAAGGACAATTTCTGAGCATGCTTATTAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTATACACCGGTTACTCTTTGATATTGGGGAAAAAATTGCTTTGGTGA 306 0.4216 MTNEDEPKNHLLGIINLSHKTLLQSDALYQYILETSVYPREHECLKEIREMREKHPRNIMATPPDEGQFLSMLIKLINAKNTLEIGVYTGYSLILGKKLLW 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00190 101 PANTHER O-METHYLTRANSFERASE-RELATED 18 95 - -
Vian4g00190 101 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 101 IPR002935 GO:0008171
Vian4g00190 101 Pfam O-methyltransferase 34 94 IPR002935 GO:0008171
Vian4g00190 101 Gene3D Vaccinia Virus protein VP39 13 97 IPR029063 -
Vian4g00190 101 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 95 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00190 Vian-Chr4 1733547 1734056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00190 4 94 Monolignol Biosynthesis Gene Families AT4G34050 68.132 1.36e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00190 K00588 - var:108322632 199.134