Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00175 ATGGAAACACTTCCCCTGTTACCACACTTTCTCTTCTTCCTCCTTTCTCTTCTCATCACGTTCAACCTTCTCTTCCAAAAAACAAAGCACAAAAACCTTCCACCAGGTCCACCACCTCTTCCCATAATCGGCAACCTTAACCTCCTCCAACGCCCCCTCCACCCTTTCCTCCAACGCATGTCCCAAACACACGGCCACGTCTTCTCCCTCTGGTTCGGTTCCCGTCTCGCCGTCGTCGTTTCGTCGCCCACCGCGTTCCAACAATGCTTCATAAAAAACGACGTCGCCTTGGCCAACCGACCTCGCTCCCTCTCCGGAAAGCACATCTTCTACAACTACACCACCGTGGGGTCCTGCTCCTACGGCGAGCACTGGCGCAACCTCCGCCGCATCATCGCACTCGACGTTCTCTCAACTCAACGCATCCACTCCTTCGCGGGAATCCGCAAAGACGAAACAGAGAGGCTGCTGCGTACCCTGGCCAAGGCCTCGCGAATGGAGTATGCGCAGGTGGAGCTAGGTTCCATGTTCCATGACATGACGTATAACAACATGATGAGGATGATATCGGGGAAAAGGTACTACGGAAATGAGATTCAGGCGAAGGATTTGGAGGAGGCGAAGGAGTTCAGAGAGACGGTGGAACAGATGCTGCAACTGGCGGGAGTTTCCAACAAGGCTGATTATTTGCCCTTCCTTCGGTGGTTCGATTTTCAGAACCTGGAGAAGAAGCTGAAGAGTATTAACAAGAGATTCGATACGTTCTTGGATGCACTCATTCACGAGCAACACAACAAGAAGGAGAGAGAGAACACTATGATGGATCATCTTCTGTATCTGCAAGAGTCTCAGCCGGAGTACTATACTGATCAAATCATCAAAGGTCTTGTTTTGGCTATGCTCTTCGCCGGAACAGATTCATCAGCCGTAACTTTGGAATGGTCACTGTCAAATTTATTGAACCAGCCAGAGGTGTTGAAGAAAGCAAGAGATGAATTGGATAGCAAAGTAGGGCAAGAGCGTTTGGTAAATGAATCAGACCTTCCAAATCTGCCTTACCTTAGAAAGATAATCCTTGAGACACTTAGGTTATACCCTCATGCACCACTGGCAATACCACATGTTTCCTCAGAAGACATAACCATTGAAGAGTTCAACGTTCCACGAAACACGATAATAATTGCTAATATTTGGGCCATGCAAAGAGACCCTGTATTGTGGGATGAAGCAACATGTTTCAAACCGGAGAGGTTTGATGAAGAGGGATTGGAGAAGAAGTTGGTGTCATTTGGAATGGGAAGAAGGGCTTGTCCGGGAGAAACTTTGGCTATGCAGAATGTTGGGTTGACTTTGGGATTATTAATTCAATGCTTTGACTGGAAGCGAGTAAATGAGGATCCCATTGATATGAGAGAGGCAGATCGGTTCACTTCATCCAGGTTAACTCCATTGAAGGCCATGTGTAAAACCCGCTCACTCATTCACAACCTTAATTTCAAATAA 1503 0.4764 METLPLLPHFLFFLLSLLITFNLLFQKTKHKNLPPGPPPLPIIGNLNLLQRPLHPFLQRMSQTHGHVFSLWFGSRLAVVVSSPTAFQQCFIKNDVALANRPRSLSGKHIFYNYTTVGSCSYGEHWRNLRRIIALDVLSTQRIHSFAGIRKDETERLLRTLAKASRMEYAQVELGSMFHDMTYNNMMRMISGKRYYGNEIQAKDLEEAKEFRETVEQMLQLAGVSNKADYLPFLRWFDFQNLEKKLKSINKRFDTFLDALIHEQHNKKERENTMMDHLLYLQESQPEYYTDQIIKGLVLAMLFAGTDSSAVTLEWSLSNLLNQPEVLKKARDELDSKVGQERLVNESDLPNLPYLRKIILETLRLYPHAPLAIPHVSSEDITIEEFNVPRNTIIIANIWAMQRDPVLWDEATCFKPERFDEEGLEKKLVSFGMGRRACPGETLAMQNVGLTLGLLIQCFDWKRVNEDPIDMREADRFTSSRLTPLKAMCKTRSLIHNLNFK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00175 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vian4g00175 500 Gene3D Cytochrome P450 22 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 FunFam Cytochrome P450 family protein 24 494 - -
Vian4g00175 500 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PANTHER CYTOCHROME P450 82C3-RELATED 13 491 - -
Vian4g00175 500 Pfam Cytochrome P450 34 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 SUPERFAMILY Cytochrome P450 34 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 CDD CYP81 65 484 - -
Vian4g00175 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g00175 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00175 Vian-Chr4 1599440 1601244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00175 10 497 Cytochrome P450 AT4G37340 50.507 2.80e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00175 K13260 - gmx:100798269 818.92