Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00171 ATGTGTAACTCTTCGCTCCCATTGTTTCTTCTTTTGGTTCTCTGCATCGTTTTAGCCTCAGCTGATCCTTATTACGGAAACTCTGACTATAAACCTTCATCATCTTCATACACAACCACAACAAGTGACACTGTCTTCTCTCTTAAAGTACCAACGTTAGATGAAACCACATTCGATAATCTTCTATCCTTTGGTTACTACCGTAAAAGCTGCCCCCAGTTTGAGTCCATTCTACACAACAAAGTGAAAGAATGGATCAAGAAGGACTACAGTTTAGGAGCTAGTCTCATGAGGCTCCACTTCCATGATTGCTCTGTCAGGGGATGTGACGGGTCTATTCTGTTGAAGCATGATGGAAGTGAGAGGACAGCAGAAGCTAGCAAGACACTGAGAGGGTTTGAAGTGGTGGATGATATCAAGACAGAATTAGAGAAACAATGTCCCAAGACTGTGTCTTGTGCTGACATTCTCACTGCTGCTGCACGGGATGCCACAGTTGAGGTAGGTGGACCTTATTGGGCCGTCCCTTATGGTAGGAAAGATGGTAAGGTCTCCATTGCTGAGGAAGCAGCTTTGGTGCCTATGGGCCATGAAAACATCACTTCCATGATTGAGTTTTTCCAGTCCAGAGGCATGTCTGTGCTTGACTTGGTCGTTCTCTCAGGGGCTCATACTATTGGAAGAACTTCATGTGGGTCCATTCAACATAGGCTATACAATTACCAAGGAACAGGAAAACCAGACCCAACAATAGATGGTAAGTATCTGAATTTCTTGCAAAGGAAGTGCAGATGGGCCTCAGAGTATGTGGATCTTGATGCTACAACACCAAAGATCTTTGACAATGTTTACTACATAAATCTGAAGAAGAAAATGGGGTTGTTATCTACTGATCAGTTGCTGTACTCAGATCCAAGGACTGCACCTCTTGTTTCAGCATTGACTGCTACACATTCTGTCTTTGAACACCAATTCGCAGTGTCCATGGGAAAGCTTGGCATTGTTGATGTTCTCACTGACCAAGATGAAGGAGAAATCAGGACCAATTGCAATTTTGTTAATGCTTATTGA 1071 0.4332 MCNSSLPLFLLLVLCIVLASADPYYGNSDYKPSSSSYTTTTSDTVFSLKVPTLDETTFDNLLSFGYYRKSCPQFESILHNKVKEWIKKDYSLGASLMRLHFHDCSVRGCDGSILLKHDGSERTAEASKTLRGFEVVDDIKTELEKQCPKTVSCADILTAAARDATVEVGGPYWAVPYGRKDGKVSIAEEAALVPMGHENITSMIEFFQSRGMSVLDLVVLSGAHTIGRTSCGSIQHRLYNYQGTGKPDPTIDGKYLNFLQRKCRWASEYVDLDATTPKIFDNVYYINLKKKMGLLSTDQLLYSDPRTAPLVSALTATHSVFEHQFAVSMGKLGIVDVLTDQDEGEIRTNCNFVNAY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00171 356 ProSiteProfiles Plant heme peroxidase family profile. 61 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 Gene3D Peroxidase, domain 2 194 332 - -
Vian4g00171 356 SUPERFAMILY Heme-dependent peroxidases 62 354 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PANTHER PEROXIDASE 25-RELATED 17 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 Pfam Peroxidase 80 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Haem peroxidase superfamily signature 216 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Haem peroxidase superfamily signature 93 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Haem peroxidase superfamily signature 169 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Haem peroxidase superfamily signature 151 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 FunFam Peroxidase 65 208 - -
Vian4g00171 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 216 226 IPR019793 -
Vian4g00171 356 ProSitePatterns Peroxidases active site signature. 93 104 IPR019794 GO:0004601
Vian4g00171 356 Gene3D - 65 354 - -
Vian4g00171 356 FunFam Peroxidase 194 332 - -
Vian4g00171 356 CDD secretory_peroxidase 62 353 IPR033905 GO:0004601|GO:0042744
Vian4g00171 356 PRINTS Plant peroxidase signature 169 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Plant peroxidase signature 95 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Plant peroxidase signature 71 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Plant peroxidase signature 131 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Plant peroxidase signature 150 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Plant peroxidase signature 327 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Plant peroxidase signature 215 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Plant peroxidase signature 271 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian4g00171 356 PRINTS Plant peroxidase signature 287 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00171 Vian-Chr4 1564724 1566232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00171 58 355 Peroxidase AT1G30870 60.333 1.38e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00171 K00430 - gmx:100527587 610.527