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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian4g00114
ATGGCTCAAGAGGGAGGAAATGAAGCCATACCAAAATTCAAAGAGAGAAGCCCAATCCCAAAAGATTTCGATGAGAAGAGTTACAACCTCAGCGGAAAAATCATGCTTTCTGCCATCGTTCTACTCTTCTTCATCGTCATTTTAATGCTCTGTCTCCACATCTACGCCCGCTGGTACCTCAGACGCGCGCGCCGCCGTCAGCTCCACCGCCACCGCGAGCTCCGCCGAACACAGCTCGTCTTCTACAACGACGCCGGCACCCCCGCCGCGGTCTCCCGCGGCCTCGACGCTGCCGTCCTCGCCTCTCTACCGGTGTTCACGTACGACCCCAAGGCACACCCGGAAAACGCGCCCGAATGCGCGGTTTGTTTGTCTGAGTTCGAACTGGGAGAACCGGGTCGGGTCTTACCGAAGTGTAACCACAGCTTCCACACAGACTGCATCGATATGTGGTTTCACTCGCACGCCACGTGTCCGCTTTGTCGTGCGCCGGTCGAGCGCGCGGCCGAACCGGAGGTTGTTATAACTGTTAGCGAACCGGAATCCGGTTCGGGGGAGAACCTAACCGGTTCTACCTCTTGTCCTTCTTCTTCGGTTGGCTCTAGGAAATCGTCGTTGGTTGGTGTGACCGTTGAGGTGCCTCCGCGGGACGAGAATTTGCGTGACGAGAATACGTCGTCGTTTCGGTCGCCGATGAGTCGCATGTTATCGTTTACGAGGATTCTTAGCAGGGAACGGAGGGGAAACACGTCCCCGTCGTCTAGCGGCGGTGATTGTAGCTCCGCCGCCCAGTCCGAGGCCGAGCGAGTGAGCGAGAGGAGACCCAGTGAGTCTTGA
837
0.5759
MAQEGGNEAIPKFKERSPIPKDFDEKSYNLSGKIMLSAIVLLFFIVILMLCLHIYARWYLRRARRRQLHRHRELRRTQLVFYNDAGTPAAVSRGLDAAVLASLPVFTYDPKAHPENAPECAVCLSEFELGEPGRVLPKCNHSFHTDCIDMWFHSHATCPLCRAPVERAAEPEVVITVSEPESGSGENLTGSTSCPSSSVGSRKSSLVGVTVEVPPRDENLRDENTSSFRSPMSRMLSFTRILSRERRGNTSPSSSGGDCSSAAQSEAERVSERRPSES
278
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian4g00114
278
MobiDBLite
consensus disorder prediction
180
205
-
-
Vian4g00114
278
SUPERFAMILY
RING/U-box
101
166
-
-
Vian4g00114
278
CDD
RING-H2_EL5-like
119
162
-
-
Vian4g00114
278
PANTHER
RING-H2 FINGER PROTEIN ATL51-RELATED
25
169
IPR044675
-
Vian4g00114
278
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
95
170
IPR013083
-
Vian4g00114
278
SMART
ring_2
120
161
IPR001841
-
Vian4g00114
278
MobiDBLite
consensus disorder prediction
177
278
-
-
Vian4g00114
278
FunFam
E3 ubiquitin-protein ligase ATL6
84
168
-
-
Vian4g00114
278
ProSiteProfiles
Zinc finger RING-type profile.
120
162
IPR001841
-
Vian4g00114
278
Pfam
Ring finger domain
119
162
IPR001841
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian4g00114
Vian-Chr4
1055202
1056038
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian4g00114
26
252
Rapid Response to Elicitors
AT3G16720
53.516
5.28e-67
209
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian4g00114
-
-
gmx:100791545
326.25
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vian4g00114
4
1055202
1056038
Vian4g00114
4
1055202
1056038
ECH
Vian1g00294
1
2613044
2613808
Vian4g00114
4
1055202
1056038
PCT
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