Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00083 ATGGGAGTTGAAAAAGAAGGGACGAAAGGTGGAGGAGGTTATGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACGTCGAAGTCCCGTAAGAAATTATTTCCGGCCAAGCCAGATTTGCCTGAGACTTTAAAGCAGGGAAGAAGAGTTGATTACAATGTGGCAATGCCAATGACACAGTCCTCCTATCTGGTTGATGAAGATGAAAGTGGTGTTGGGGCAAGTCTAAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAACATTTGGTACAAGGGCTCCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTTCTTCAAGTTTTTCTGATCCTTATGCTACCCCATATTTTGATACCCGGTCCCTTCAAGATGCTCAGTACTTCAAGAAAAATTTTGGTCACCAGCATGACTATCAGACCCCATGTTCTGGAAAGCTGGTTGAAAAGGTTGCGGGCTCATCTAGGAGCTTCATTGAGCCAAAGCCGCAAAAGGCCATTACCAGGCCAATTGAAAAGTTCCAAACAGAAGTGTTGCCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCCATCAAGAGTCCCAGCTTTGTTCCCACCAATAATGCTGCATATATAATGGAGGCTGCGGCAAGAATTATTGAGCCTGGTTCCCAAGCTGGTAACAGGGCTAAGACACCTCTGGTAGCTTCATCAGCACCACTGAGAGTGAGAGAACTAAAAGATAAGGTGGAGGCTTCACAAAAGGGACCTCTAATTAGGCCATCCTCCATGACCTCTAGAACTCGAGATCTAAAAGAGAAAAGAGAACTTTCTCAAAGAATGGCCAGGCTTTCCGTATCTTGTCAAAGATCGGTCGAGTCAAATGCTGCCAAGTATCTCAAAGGACAATCTTTGAACAGAAGCTGGAATGGATCTGTGGATATGTCCATCAAATCTCCTACACACGAGGAAGAAGTTTCTTCTTTGAAGAATAATAAGGGGAAGTCCATTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTGCGACTGGTGGAAGAAGTATGACGGCCCAGAAAGAGAATCCTGACTTGAAATCCAACCAACCAGTGAAGGGAAGCGTGCAGAAAAATTTTCACAAGAAATCTTCTACTCAGAATTCATCTGGTGCTCTCAGACAGAATAATCTGAAACAGAATTATTCTACTGACAAAGACAAATTACCATCAAAGCCATTGACGACCAATTCCCACAGTAGAAAAGTTCTGACTGGGGATTCCCCTTACGGACGTCATAGAAGCTCCAGTAATAAATCCATTGCAAAATCTAGAGTTGGATCCAGAAAGTCAGCTATGGAGGTGACTGATAGTGAAAAGGAAGTCTTATACACCAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAATGATAGGGTTGTGGACAATTTGTTCATTGAAAAAACTCAAAACCCTGCTAAGTCTAACCTAGTGAGTAATAAACAAAATAGTTGGGCTGAAGATGTAAAAAAGAAAGACATGGATGTAGTTTCATTCACATTCACCACACCATTAACTAGGAGCAATCCAGGTTTTGAGACATCTGGAAAAGCTGCCCAAAATACTAATGGTCTTTCCCTGGATCAACGCATTAAAAGGGTGTTGCTTGACCCAGACAATACAAGGTCCCCAATAGGATACAATTTGATTGGTGGTGGAGATGCCTTGGGTGTCCTTTTGGAACAGAAATTGAGAGAATTAACATGTATGGGAACAATTTGTCATGACTCTTCTAAAGTGAAGCAGCCTACTGTATCAGATGATCAAGTAACCGGCTTGAATGTAGTTAACCTCAATCCAATGTTCCAACAGAAAAAAGACCAAGATGTATTCTTTACAGACAAGTTAAGCAACAACTATGATTCAGACATCTCCTTCAGGGGTCTTCCTGAATTATCATTGAAGCAGAACTCATGGATTGATGAGATGGAACCACAGTTACTCAATTGCAGACACCCAAGTCCTATCTCTGTTCTCGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCATTGAGCACAGATGTTACTAGTACAGAAGGAAGCAAGTTGTGGTCATCTGTTCAAGCTCAAGAAGTTCAAGGCTTGAATTTTTCAAGGAAGTTCTATGCTTGTGAAACTGATGCTGAGTTATCCGATTCCGCTTCTTCAACCTCAGCTGGGAATATGATGAAGCACACAAGTAGTGTCACAAGGTTTGGTAGTAGCTCAAGGACGTGGGAGTTGGATTATGTGAAAGATATATTGAGTAATGTTGAGTTGATGTATATGGATATTTCCCTTGGCCATGCTAGTGATGTTATAAATTCTCATATATTCAAACAGTTCGAAGGCCGGAAGGGAGGGTTTAAGTGTGATGAGGAGTCTAGGATAAGAAGGAAAGTTACATTTGATTGTGTGAGTGAATGTTTGGACTTGAGATGCAGGCGTTATGTAGGTGGAGGATTCAAAATGTGGACCAAAGGGCTTGAAATGGTGAAAAGAAAAGAATGGTTGGCAGAAGATGTGTACAAGGAGATCTCATGTTGGAGAGGAATGGGAGACTCAATGGTGGATGAGCTTGTGGACAAGGACATGAGCAGCCAGTATGGAAGATGGCTAGATTATGAGGTTGATGCCTCTGAACTCGGATCAGAGGTTGTGGACCAAATATTTAATTCTTTGGTTGATGATGTTGTCACTGAAATCTTGCAATTGTAA 2805 0.4168 MGVEKEGTKGGGGYVGGFFQLFDWTSKSRKKLFPAKPDLPETLKQGRRVDYNVAMPMTQSSYLVDEDESGVGASLRGSCDHSYASSVTDDETFGTRAPSVVARLMGLDSLPSSSFSDPYATPYFDTRSLQDAQYFKKNFGHQHDYQTPCSGKLVEKVAGSSRSFIEPKPQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIEPGSQAGNRAKTPLVASSAPLRVRELKDKVEASQKGPLIRPSSMTSRTRDLKEKRELSQRMARLSVSCQRSVESNAAKYLKGQSLNRSWNGSVDMSIKSPTHEEEVSSLKNNKGKSISLAIQAKVNVQRREGLSATGGRSMTAQKENPDLKSNQPVKGSVQKNFHKKSSTQNSSGALRQNNLKQNYSTDKDKLPSKPLTTNSHSRKVLTGDSPYGRHRSSSNKSIAKSRVGSRKSAMEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIEKTQNPAKSNLVSNKQNSWAEDVKKKDMDVVSFTFTTPLTRSNPGFETSGKAAQNTNGLSLDQRIKRVLLDPDNTRSPIGYNLIGGGDALGVLLEQKLRELTCMGTICHDSSKVKQPTVSDDQVTGLNVVNLNPMFQQKKDQDVFFTDKLSNNYDSDISFRGLPELSLKQNSWIDEMEPQLLNCRHPSPISVLEPSFSIESCESSLSTDVTSTEGSKLWSSVQAQEVQGLNFSRKFYACETDAELSDSASSTSAGNMMKHTSSVTRFGSSSRTWELDYVKDILSNVELMYMDISLGHASDVINSHIFKQFEGRKGGFKCDEESRIRRKVTFDCVSECLDLRCRRYVGGGFKMWTKGLEMVKRKEWLAEDVYKEISCWRGMGDSMVDELVDKDMSSQYGRWLDYEVDASELGSEVVDQIFNSLVDDVVTEILQL 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00083 934 MobiDBLite consensus disorder prediction 255 284 - -
Vian4g00083 934 Pfam DUF761-associated sequence motif 85 116 IPR032795 -
Vian4g00083 934 Pfam Domain of unknown function (DUF4378) 776 926 IPR025486 -
Vian4g00083 934 MobiDBLite consensus disorder prediction 359 455 - -
Vian4g00083 934 MobiDBLite consensus disorder prediction 356 468 - -
Vian4g00083 934 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00083 Vian-Chr4 761762 765474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00083 16 932 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 29.799 7.07e-88 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00083 4 761762 765474 Vian4g00083 4 761762 765474 ECH
Vian1g00321 1 2855326 2858940 Vian4g00083 4 761762 765474 PCT