Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00041 ATGGCTGAAATGTTAGAATCAAGTAGAAAAGCTGTGAATGGGAGAGAGGGGTATCTTAAAAGGGAAGAAGAAGAAGAAGATGAGTTGGCGTTTTGCATGGAAAAGACGGTTGCTTTTGTGGTTCCAATGGCTTTGAAAACATTGTCTGAGCTGAGGGTGTTTGATATCTTAGCCAAAGGTGGCAAACTCTGTGCGAAGGAGATCGCAGTTGAGATAGGAAGCAAGAACCCTGAAGCTCCTGCAATGTTGGATCGTCTTCTTAGCCTTTTGGTGAGTCACTCTCTGCTATCTTGTTCTATCTCTCAACAAGAACAACACCCTCAGAAGTTCTACACCCTCTCTCCTGCTTCCAAATATTTTGTCACTGATCCTCAAGGTGCATCATTGGGATCCTCCGTCAAATTACTTCTGGATGACATCTTCTTGAAAAGCTGGGGCGAACTGAAAGGAGCAATCCTAGAAGGGGGTGTGGCATTCGACAGGGCCCATGGCATGCATGCCTTCGAATATCCACGTGTGGATCCCAGGTTTAACGAGGTTTTCAACAACGGTATGATAGGCCTCACCACTATAATTATGAAGAGGATTCTTGAGTTATACAACGGTTTTGAGCATGTCACCAGGCTCGTCGACGTTGGTGGAGGTTATGGAGTCAACCTCAAATTGATCAAATCCAAATACCCTCACATTCAGGCTATTAATTTTGACTTGCCTCATGTGGTGGAAAATGCCCCTCTCCATTCAGGTGTGGAGCATGTGGGAGGAGACATGTTTGAAAGCGTTCCTTCAGGAGATGCCATTTTTATGAAGTGGGTACTTCATGATTGGAGTGATGAACATTGCGTGAAGCTGTTGAAGAATTGCTACAAAGGGATTCCTGATGATGGAAAGGTTATTGTGGTGGACTCAATTGTGTCGATGGTGCCGGAGACAAGTGTTACTGCTAAGGGTGCTTTGGGATCTGATCTCATAATGATGACTCAAAACCCAGGAGGGAAAGAGCGAACACGTCAACAAATCATAGAATTGGCAGAAGCATCTGGGTTTAGTGGGATCAGATTCATATGCTCTGTATGTGGCAACTGGGTTATGGAATTCTACTAG 1104 0.4475 MAEMLESSRKAVNGREGYLKREEEEEDELAFCMEKTVAFVVPMALKTLSELRVFDILAKGGKLCAKEIAVEIGSKNPEAPAMLDRLLSLLVSHSLLSCSISQQEQHPQKFYTLSPASKYFVTDPQGASLGSSVKLLLDDIFLKSWGELKGAILEGGVAFDRAHGMHAFEYPRVDPRFNEVFNNGMIGLTTIIMKRILELYNGFEHVTRLVDVGGGYGVNLKLIKSKYPHIQAINFDLPHVVENAPLHSGVEHVGGDMFESVPSGDAIFMKWVLHDWSDEHCVKLLKNCYKGIPDDGKVIVVDSIVSMVPETSVTAKGALGSDLIMMTQNPGGKERTRQQIIELAEASGFSGIRFICSVCGNWVMEFY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00041 367 PANTHER O-METHYLTRANSFERASE 38 349 IPR016461 GO:0008168
Vian4g00041 367 Pfam Dimerisation domain 43 91 IPR012967 GO:0046983
Vian4g00041 367 SUPERFAMILY "Winged helix" DNA-binding domain 23 123 IPR036390 -
Vian4g00041 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 367 IPR016461 GO:0008168
Vian4g00041 367 Gene3D - 11 120 IPR036388 -
Vian4g00041 367 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Vian4g00041 367 PIRSF O-mtase 11 367 IPR016461 GO:0008168
Vian4g00041 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 367 IPR029063 -
Vian4g00041 367 FunFam Caffeic acid O-methyltransferase 121 367 - -
Vian4g00041 367 Gene3D Vaccinia Virus protein VP39 122 367 IPR029063 -
Vian4g00041 367 FunFam Caffeic acid 3-O-methyltransferase 13 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00041 Vian-Chr4 427827 429202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00041 16 366 Monolignol Biosynthesis Gene Families AT5G54160 51.695 4.98e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00041 K13066 - vun:114162418 486.878