Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00019 ATGTGGTGGAGATCAGCGTCATTCATCATGGACAGGCAGCAGAACGAGGCTGCTCTCAAGGGAGACACCGTCGCTCCTACCGAATCATCGATATCAAACCCTAACCCTAATCCTAATCCTAATCCCAACACTAACCCTAAGACCTCTGCCTACTATGAGACCAGAGCAGCACATCATGGCGTTGTCACCAGCGACTGGCTGGCCCAGGCTCAGGCCGCCATTGGGCCGGACCCTGATCCTCTACCTCAACTCAGGCCCGATCCTGACAAGCCATTCAGCGTCATCAAGGAGTTTAATAACTGGCGGATACAGCCCCATTTGGCGGAGGCCGTCGCCGCCATTCGCGCCTTGGCCGCCGTCATAAGGACCAGCCGGGCTACCACCATGATGCAGCTGGAAATGGAGCTGAAGAAGGCCTCCGATACTCTGAAGTCGTGGGATGCCACTTCTATCTCTTTAACAGCGGGCTGTGATCTCTTTATGCGATATGTCACTCGGACTTCTGCTTTAGAATACGAAGACTTCAATTCCGCTAAATCTCGCTTGATTGAGCGTGCGGAGAAGTTCGGCGAAATCTCCCACAAGGCCCGCAAAGTTATCGCGATGTTGAGTCAGGATTTCATATTTGATGGTTGCACAATTTTGGTTCATGGTTTTTCCAGAGTTGTGTTGGAAGTCCTCAAACTGGCAGCACAAAACAAGAAATTATTTCGGGTCTTCTGCACAGAGGGAAGACCAGATCGAACAGGATTGCGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTACTAATAGATTCTGCTGTGGCATATACTATGGATGAGGTGGACATGGTTTTTGTAGGTGCAGATGGAGTTGTGGAAAGTGGGGGCATAATCAACATGATGGGAACCTACCAAATTGCATTGGTTGCACACGGGATGAATAAACCAGTTTATGTCGCTGCTGAAAGCTACAAGTTTGCTCGTCTCTACCCTCTTGACCAAAAGGATTTAGCCCCTGCTTTACGCCCTATTGATTTCGGTGTACCTATTCCATCCAAGGTTGAGGTTGAAAGGTCCGCGCGGGACTACACCCCTCCTCAATACCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACCCCATCTGTTGTCAGTGATGAGCTGATCCAGCTATACTTATAG 1176 0.4957 MWWRSASFIMDRQQNEAALKGDTVAPTESSISNPNPNPNPNPNTNPKTSAYYETRAAHHGVVTSDWLAQAQAAIGPDPDPLPQLRPDPDKPFSVIKEFNNWRIQPHLAEAVAAIRALAAVIRTSRATTMMQLEMELKKASDTLKSWDATSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISHKARKVIAMLSQDFIFDGCTILVHGFSRVVLEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHGMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 391
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00019 391 Coils Coil 129 149 - -
Vian4g00019 391 MobiDBLite consensus disorder prediction 19 49 - -
Vian4g00019 391 Gene3D - 195 391 IPR042529 -
Vian4g00019 391 SUPERFAMILY NagB/RpiA/CoA transferase-like 103 390 IPR037171 -
Vian4g00019 391 FunFam Translation initiation factor eIF-2B subunit alpha 195 391 - -
Vian4g00019 391 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 58 391 - -
Vian4g00019 391 FunFam Translation initiation factor eIF-2B subunit alpha 90 192 - -
Vian4g00019 391 Gene3D - 91 192 IPR042528 -
Vian4g00019 391 Pfam Initiation factor 2 subunit family 104 379 IPR000649 GO:0044237
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian4g00019 Vian-Chr4 244956 247909 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00019 1 391 Eukaryotic Initiation Factors Gene Family AT1G53880 78.841 0.0 603