Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00011 ATGTCTGGAGCAGAAGGAGAAGATGGAAGAAAGAGCACGGAGGAAACTGGTGTAACAGCAGAGGCAGAGAAGAACCTTAAGCTGAAAGAGCGAAAGGTATCATGGGCAAAACTAAGACGCATAGATTCTCTGAATTTAGAAGCTGGAAGAGTTTCCATGGTTGCACACAATCCTCACAAGATGGGATGGAGAATTACTCTCAGCTTAGCATTTCAAAGCATAGGAGTTGTGTATGGTGATATTGGGACATCACCCCTTTATGTATATGCCAGTACCTTCACCGATGGAATCAAGCATAATGATGATATTTTGGGTGTTTTGTCTCTTATCATCTACACCATCCTTCTCATACCTATGATCAAATATGTCTTCATCGTACTGTGGGCTAATGACAATGGCAACGGTGGGGCCTTTGCACTGTATTCATTAATATGTAGGCACATAAAAATGAGTTTGATTCCAAATGAACAACCAGAGGATAGGGAGCTTTCTAATTACAAACTAGAAACCCCATCGACTCAGATGAAACGGGCTCACAAACTAAAACAGAAACTCGAGGGCAGTAATGTTGCACGAGTTGTGCTTGTGCTTCTTGCAATAATGGGAACTTCCATGGTTATAGGAGACGGCATTCTTACTCCATCAATATCAGTACTTTCAGCTGTAAGTGGGATCAGTAAATCATTAGGTCAAGATGCTGTTGTGGGAATCACAATAGCAATTTTGATAGTCCTATTCTCTGTTCAACGTTTTGGTACTGATAAAGTGGGATTCTCATTTGCTCCAATTATTTTGGTGTGGTTTTTGTTCATCGCTGGAATTGGTTTTTACAACTTATTCAAATATGACATTGGAGTATTACGTGCCTTTTATCCAAAATATATATATGATTACTTCAAACGTAATGGAAAGAATGGATGGTTATCACTTGGTGGAGTTTTTTTATGCATAACAGGATCTGAGGCTATGTTTGCTGACTTGGGTCACTTTAATGTACGAGCCATTCAAATAAGCTTTTCTTTCATTACATGTCCATCAATCGTGATTGCATACATTGGGCAAGCAGCATATTTGAGGAAGTTTCCTGACAATGTAGCTAATACTTTCTATGATTGCATTCCAGGTCCCTTATATTGGCCAACTTTTGTTGTGGCTGTTGCTGCTGCCATTATAGCTAGCCAAGCAATGATTACGGGAGCATTCTCCATTATATCCCAAGCCCTAAGTCTAGGTTGTTTTCCAAGAGTTAGGGTGGTGCACACTTCCATCAAACATCATGGTCAGGTGTATATTCCAGAAATAAACTACATGTTCATGATCGCATGTATCGTGGTGTGTGCTGCCTTCAAGACCACAGAAAAGATTAGTCATGCATATGGGATTGCGGTTATTGGTGACATGATGATTTCAACAACTCTGGTTTCGCTAATAATGCTTGTTTTATGGAAAAAGAGTCTATGGCGTGTGACATTGTTCTTCTTTGGATTCGGTTTCATTGAATTAGTTTATTTAACATCTCAACTGACCAAGTTTACAGGAGGAGGGTATTTTCCAATTGTATCAGCTATGTTCTTGACGTCGATTATGGGAATTTGGCACTATGTGCACAAAGAAAGATACATGTTTGAGTTAAAAAATAAGGTATCAAGTGCATATCTGAATGAAGTGGCGAACAATCCAGATGTAAGGCGAGTACCAGGAATTGGACTTTTGTATTCTGAGTTGGTGCAAGGCATTCCTCCTATATTCCCACACCTTATAGCTAACATTCCATCTGTCCACTCAATTCTTGTGTTTGTGTCTATTAAAGCAATTCCCGTGAGTAGTGTTGCATCGGAGGAGAGGTTCTTGTTTCGACAGGTGGAGCCAAGAGAGTACAGAGTTTTTCGTTGTGTTGTGAGGCATGGTTACAATGATGTTCTTGAAGATCCTGCAAAGTTTGAGTCAGAATTGATACAAAATCTAAAGGCGTTCATTCAGGAGGAGAACTACCATATGGTGGAAGTGGAGGGAATTGGAAATGCAATCGAACAAACAACGGTGGTTGAAAGCAGTGATAAGAGGGAAGCACATCGTTCCTCTAGTAGAATAATCCCCAATCAACCAGCATCAGCCTCATCTGATTCCATTCGATCATTGGGGGGGAGTGACACCAAGTCATATGCTAACTTCCTTGCCCCACCCATCCATGGAGCTGAAGAGGAACTCAAATTCATAGAAAAAGCATCAGAGAAAGGCGTGGTGTACATGCTGGCAGAAGCAGAGGTTGTGGCTCACCCAAACTCCTCCATCATCAATAAGATCATTGTGAATTATGTGTACAGTTTCTTCAGAAAGAACTTTAGACAAGGTCAGAGTTCCATGGCAATCCCACGGAATAGACTTCTCAAGATTGGAATGACATACGAAATATGA 2415 0.4058 MSGAEGEDGRKSTEETGVTAEAEKNLKLKERKVSWAKLRRIDSLNLEAGRVSMVAHNPHKMGWRITLSLAFQSIGVVYGDIGTSPLYVYASTFTDGIKHNDDILGVLSLIIYTILLIPMIKYVFIVLWANDNGNGGAFALYSLICRHIKMSLIPNEQPEDRELSNYKLETPSTQMKRAHKLKQKLEGSNVARVVLVLLAIMGTSMVIGDGILTPSISVLSAVSGISKSLGQDAVVGITIAILIVLFSVQRFGTDKVGFSFAPIILVWFLFIAGIGFYNLFKYDIGVLRAFYPKYIYDYFKRNGKNGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFSFITCPSIVIAYIGQAAYLRKFPDNVANTFYDCIPGPLYWPTFVVAVAAAIIASQAMITGAFSIISQALSLGCFPRVRVVHTSIKHHGQVYIPEINYMFMIACIVVCAAFKTTEKISHAYGIAVIGDMMISTTLVSLIMLVLWKKSLWRVTLFFFGFGFIELVYLTSQLTKFTGGGYFPIVSAMFLTSIMGIWHYVHKERYMFELKNKVSSAYLNEVANNPDVRRVPGIGLLYSELVQGIPPIFPHLIANIPSVHSILVFVSIKAIPVSSVASEERFLFRQVEPREYRVFRCVVRHGYNDVLEDPAKFESELIQNLKAFIQEENYHMVEVEGIGNAIEQTTVVESSDKREAHRSSSRIIPNQPASASSDSIRSLGGSDTKSYANFLAPPIHGAEEELKFIEKASEKGVVYMLAEAEVVAHPNSSIINKIIVNYVYSFFRKNFRQGQSSMAIPRNRLLKIGMTYEI 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00011 804 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 61 803 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian4g00011 804 MobiDBLite consensus disorder prediction 695 714 - -
Vian4g00011 804 NCBIfam potassium uptake protein 69 804 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian4g00011 804 MobiDBLite consensus disorder prediction 1 20 - -
Vian4g00011 804 Pfam K+ potassium transporter 70 639 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian4g00011 804 MobiDBLite consensus disorder prediction 682 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00011 Vian-Chr4 158726 162980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00011 27 804 Inorganic Solute Cotransporters AT4G13420 58.869 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00011 K03549 - gmx:100814313 1329.31