Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02755 ATGGACAAATCTCTGGTGTTTAAGGTGCAGAGGCGGGAGCCAGAGCTGATAGCTCCGGCGAAGGCCACTCCTCGCGAAGTGAAGCTACTCTCAGACATAGATGACCAAGACGGGTTAAGGTTTCAGATTCCAGTGATACAGTTCTATCGATATGATCCAGCGCTGGCAGGGAGAGACCCTGTTGGGGTTATCAGAGAGGCTTTGGCCAAAACGCTTGTGTTTTACTATCCCTTTGCAGGTAGGCTGAGGGAAGGAGCCGGTCGGAAACTCATGGTGGACTGCACAGGGGAGGGTGTTTTATTCATTGAAGCTGATGCAGATGTCACACTCGCTCAATTTGGTCACACTCTTCAACCTCCTTTCCCCTGCTGGGAGAATCTTCTTTACGATGTTCCTTCCTCCCAAGGAGTTCTTCACACTCCCCTTCTCCTCATCCAGGTAACGCGCCTGAAGTGCGGCGGTTTCATATTCGCGCTCCGTCTGAACCACACCATGAGTGACGCAGCGGGGCTGGTCCAGTTCATGAACGCCGTGGGAGAGATAGCGCGCGGGAGGCAGGAGCCATCGGTCCCACCTGTGTGGCGCAGAGAACTTCTGAACGCGCGGGACCCACCGCGAGTGACGTGCATCCACCGTGAGTACGACGTCGTCCCCGACACGAAAGGCACGATCATCCCCGTGGACGACATGGCCCACCGCTCCTTCTTCTTCGGCCGCAGCGAACTTTCGGCCATCCGGCGCCTCCTCCCCCCTCACCAGAACCAGTGCTCCAGCTTCGATGTCCTGACCGCGTGCCTATGGAGGTGCCGCACCCTGGCCCTGCAACCTGACAGCGACGAGGAGGTCCGCATTATATGCATCGTGAACGCGCGCTCCAAATTCAACCCTCCTCTGCCAGAAGGTTACTACGGCAACGTTTTTGCTTTCTCCGTGGCGGTTACGACTGCGGGAAAGTTATGCGAGAATCCGTTGGGGTATGCTTTGGAGTTGGTGAGGAAGGCGAAGGCGGATGTGAGCGAGGAGTACATGCAGTCGTTGGCAGATCTGATGGTTACAAGAGGACGGCCTCACTTCACGGTGGTGAGGTCGTATCTGGTGTCGGATGTGAGACGAGCAGGGTTCGAAGACGTTGACTTTGGGTGGGGTAAAGCTGTGTATGGAGGACCCGCGAAGGGCGGTGTTGGAGCCATTCCTGGTGTGGCTAGCTTTTACATACCCTTCAGAAATGATAAGGGAGAAGAAGGTTTGGTTATGCCAGTTTGCTTACCCTCTGAAGCCATGCAGAGGTTTGAGAAGGAGTTGGACTCTGTGCTCAACAATCGCCTTCCACCAACTATTAATACTATTTCTTCTTCAAATTCCAGGCAGCTCCTTCTTTCTTCCTTGTAG 1389 0.5486 MDKSLVFKVQRREPELIAPAKATPREVKLLSDIDDQDGLRFQIPVIQFYRYDPALAGRDPVGVIREALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIEADADVTLAQFGHTLQPPFPCWENLLYDVPSSQGVLHTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMNAVGEIARGRQEPSVPPVWRRELLNARDPPRVTCIHREYDVVPDTKGTIIPVDDMAHRSFFFGRSELSAIRRLLPPHQNQCSSFDVLTACLWRCRTLALQPDSDEEVRIICIVNARSKFNPPLPEGYYGNVFAFSVAVTTAGKLCENPLGYALELVRKAKADVSEEYMQSLADLMVTRGRPHFTVVRSYLVSDVRRAGFEDVDFGWGKAVYGGPAKGGVGAIPGVASFYIPFRNDKGEEGLVMPVCLPSEAMQRFEKELDSVLNNRLPPTINTISSSNSRQLLLSSL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02755 462 PANTHER ACYL TRANSFERASE 4 7 437 - -
Vian3g02755 462 Gene3D - 220 434 IPR023213 -
Vian3g02755 462 Pfam Transferase family 8 434 - -
Vian3g02755 462 Gene3D - 4 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02755 Vian-Chr3 42462070 42463680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02755 8 434 Monolignol Biosynthesis Gene Families AT5G48930 31.910 2.26e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02755 K19861 - gmx:100797017 777.704