Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02746 ATGCATAAGGAAGCTGAGGATGACTATGCCCACCTTTCTAGCTTACTTCAAGAGTTCACCAGTATTCCCAACATTGACAAGGCATGGCTTTTTAGCTCTCCAGGGTTGCACTTGCAAGGAATGTTTGCAGTTTCCCAATCAGATCTTTTAACAAACACGAGGAGGACATCCATCATGTCCTGTAACATTCTAAAAGAAAGGGACAGTTCTGTGAATTTTCTGTGGGCTCCGTTTCCAATAGAGATGTCTGGCGTGTCCGTGATTGTTCCATCACCATCTGGCTCAAAGCTCTTAGTGATTCGAAATCCAGAGAATGAAGCTGCTTGTTGTTTTCAGATTTGGAGCTCTTCTCGAATGGAGAAGGAGTTCCACATTCCTCAATCACTGCATGGCTCAGTATACAATGATGGATGGTTTGAGGGTGTCTCGTGGAACATGAATGAAACATGTGTAGCATACGTAGCAGAAGGGCCCTCTCCTGCAAAGCTCACATTTAATGGTTTGTGGGGCTACAAGATAGATGGCTGTGCAGATAAGGATTCAGGTTATTGGAAATGTCAAGGGGACTGGGAGGAGGACTGGGGAGAAACATATGCTGGAAAGAGACAGCCTGCACTATTTGTTATCGACATCAACAGTGGTGAGGTGCGAGAAGTCAAAGGAATTGACAAATCCTTGAGTATTGGCCAAGTTGTATGGGCTCCATTTACTGAAGGCTCAGAACAATACCTTGTTTTCGTTGGGTGGTCATCTAAGCCAAGAAAACTTGGCATTAAGTATTGCTCTAACAGACCTTGCGCATTATATGCTGTTAGACTTAGAGCACTGCATCATGATTCAAAATCTAATGAACCAGTGCTCCAGTCAACTGAAGAATTTCATATGCTGAACCTTACTCAAACTATAAGCAGTGCATTCTTTCCCCGGTTCAGTCCAGATGGAAAATTTCTTGTGTTTTTATCTGCAAGAAGTGCTGTGGACTCTGGAGTGCATAATGCTACAAATTCACTTCACAGAATTGATTGGCTAACTAATGGAAAACCTTTCCAATCTTTCAAAATTTATGACATCATTCCTGTTGTGATGTGCGCTGAAGACGGTTGCTTCCCTGGGCTTTATTGCACCACTATTCATAGTAATCCTTGGTTATCTGACAACTGCACAATGATTATATCATCCATCTGGCACAGCAGTGAAGTTCTGCTCTCAGTGAATGTGCTGAGTGGGGAGATAGTACATATCAGCCCTGTAGATCCAAATTTCTCGTGGAATCTTCTTACGCTGGATGGGAACAATATTGTTGCCATTTCCAGCAGTCCGGTTGATTTTGCTCAAATAAGGTATGGAAAGGCCATTAAGAAGGAGACAAACAATACTACATGGAGTTGGTCAAATATATCCAGTCCCATATTCAGATGCTCTGACAAGGTTAGATCTTTGCTGTCCTCTCTCCAGTCTAGTATACTGAGGATCTCAGTTAAGGATGCTCATGATGGTCAAACAAAAGGTGCTACAAAACCTTTTGAAGCTATATTTGTGTCTTCTAAAACCAATACCAAGATTGAATTTGATCCGTTAATTGTGATCCTTCATGGAGGGCCCCAAGACGTCTCTTTGTCATACTTTTCTAAGTATTTGGCTTTTCTATCTACAGTTGGATACAGCTTGCTGATTGTTAATTACAGAGGTTCATTGGGATTTGGTGAGGAAGCATTGCAATCTCTTCCAGGGAATGTTGGGTCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTCATCAACTTGGGTCTTGCCAGCCCATCTAAGATTACAGTAATGGGCATTTCACATGGTGGTTTTCTGACAACTCAGTTGATTGGCCAGGCACCAGACAAGTTTGTAGCAGCGGCTGCAATCAATCCTGTTTGTAACCTTGCACTGATGATTGGAACAACAGATATCCCTGATTGGTGCTATGTAGAAGCTTGTGGAACCACTGCCAGAAATTGCTTTACTGAACCACCTTCCGCAGATGATTTGACTCTCCTTTATAACAAGTCTCCCATTTCACACGTCTCAAAGGTAAAAGCACCAACACTATTCCTATTAGGTGCCCAAGATGTTCGTGTTCCAATTTATGATGGGTTGCAATATGCTCGGGCTTTGAAGGAGAAAGGTGTAGATGTCAAGATCATTATGTTTCAAAATGATGTTCATGCACTGAAAAGGCCACAATCTGACATGGAATCTTTCCTTAACATTGGGGTGTGGTTCAACAAGTACTGCAAATACGGGGCAAGCGAATCACGAGATTTCCTGAAGACCTAA 2313 0.4241 MHKEAEDDYAHLSSLLQEFTSIPNIDKAWLFSSPGLHLQGMFAVSQSDLLTNTRRTSIMSCNILKERDSSVNFLWAPFPIEMSGVSVIVPSPSGSKLLVIRNPENEAACCFQIWSSSRMEKEFHIPQSLHGSVYNDGWFEGVSWNMNETCVAYVAEGPSPAKLTFNGLWGYKIDGCADKDSGYWKCQGDWEEDWGETYAGKRQPALFVIDINSGEVREVKGIDKSLSIGQVVWAPFTEGSEQYLVFVGWSSKPRKLGIKYCSNRPCALYAVRLRALHHDSKSNEPVLQSTEEFHMLNLTQTISSAFFPRFSPDGKFLVFLSARSAVDSGVHNATNSLHRIDWLTNGKPFQSFKIYDIIPVVMCAEDGCFPGLYCTTIHSNPWLSDNCTMIISSIWHSSEVLLSVNVLSGEIVHISPVDPNFSWNLLTLDGNNIVAISSSPVDFAQIRYGKAIKKETNNTTWSWSNISSPIFRCSDKVRSLLSSLQSSILRISVKDAHDGQTKGATKPFEAIFVSSKTNTKIEFDPLIVILHGGPQDVSLSYFSKYLAFLSTVGYSLLIVNYRGSLGFGEEALQSLPGNVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTQLIGQAPDKFVAAAAINPVCNLALMIGTTDIPDWCYVEACGTTARNCFTEPPSADDLTLLYNKSPISHVSKVKAPTLFLLGAQDVRVPIYDGLQYARALKEKGVDVKIIMFQNDVHALKRPQSDMESFLNIGVWFNKYCKYGASESRDFLKT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02746 770 FunFam Acylamino-acid-releasing enzyme 497 757 - -
Vian3g02746 770 SUPERFAMILY alpha/beta-Hydrolases 525 758 IPR029058 -
Vian3g02746 770 SUPERFAMILY DPP6 N-terminal domain-like 82 442 - -
Vian3g02746 770 Pfam Prolyl oligopeptidase family 542 758 IPR001375 GO:0006508|GO:0008236
Vian3g02746 770 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 6 274 IPR045550 -
Vian3g02746 770 Gene3D alpha/beta hydrolase 504 757 IPR029058 -
Vian3g02746 770 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 5 758 - -
Vian3g02746 770 ProSitePatterns Prolyl endopeptidase family serine active site. 586 616 IPR002471 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02746 Vian-Chr3 42355208 42362973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02746 522 755 Carbohydrate Esterase AT5G36210 24.359 5.53e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02746 K01303 - gmx:100812681 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02746 3 42355208 42362973 Vian3g02746 3 42355208 42362973 ECH