Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02745 ATGGAAGACGAAAACCAAGCCACGGAGCAGGAATACGCCTTTCACTCCGACCTGCTCCACCAATTCACCGTCATCCCCTCCGTCGACAAGGCATGGCTCTTCAACTCCCACGCCGGCTTGGCTTCGCAGGCAATGTTTTGCGTTAGTCAACCCAACCTTTTGACCAACAAGAGGAAGAAGTCCATCCTCTCCGCTTCCCTGCTCAGACAAAGCGACGGCACCGTTGCGTTTCACTGGGCTCCCTTTCCGATCGAATTGAGCGGAGTCTCCGCCATGGTTCCGTCGCCTTCTGCCTCCAAGCTGCTGATTGTTCGGAATCCCGAGAATGAAGGTCCTTGCCGCTTTGAAATTTGGAGCTCCTCTCAACTGGAAAAGGAGTTCCATGTCCCTCAATCTAAGCACGGTTCTGTGTACACTGATGGATGGTTTGAGGGGATCTCTTGGAATTTGAATGAAACTTGTATAGCGTATGCAGCTGAAGAACCAGCTCCTGCAAAGCCCACATTCAATGATCTGGGTGGCTACCAGAAACGTAGTTCTTCAGACAAGGATGGTGGTACTTGGAAAGCTCAAGGAGAATGGGAGGAAGAATGGGGAGAGACGTATGCAGGGAAGAGGCAGCCTGCCCTTTTTGTCATCGACATAACTAGTGGAGAGGTACAGGCCGTCAAAGGAATTGACAAGTCTTTGAGTGTTGGACAAGTTGTATGGGCTCCAGCAATCGAAGGCTCTGTGCAATATTTGGTCTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGTTATAACAGGCCATGTGCAATATATGCTGTTAAAGCACCACACCATGAGTCAAAAGCAAATGAAACTGAGACGTACTCAACTGAAGATGTTCAAGCTGTTAACCTAACTCAAACCTTAAGCAGTGCTTTCTTTCCACGGTTCAGCCCAGATGGGAAGTTTCTTGTATTTGTATCTGCAAGAAGCTCAGTTGATTCTGGCGCCCATTCTGCTACAGATTCACTTCATAGAATGGATTGGCCTGAGGATATGAAGCTTTATCAATCTTCTAAAATTCATGAAGTGATTCCAGTTGTGTTGTTTGCGGAGGATGGCAGCTTCCCAGGGCTTTACTGTTCAAATATCCTCAGTGATCCATGGCTTATCGATGGCCAGACCTTAGTTATAGCTTCTGTATGGCACAGCAATCAAGTTTTACTTTCCATCAATGTGCTGAGTGGAGAAATATTGCGAATCACCCCTGATAACTCAAATTTCTCTTGGAGTCTTCTTACATTGGATGGGAACAATATTCTTGCTGTTTCTAGCAGTCCAGTAGACGTTCCTCAAATCAAGTACGGAGCTATTGTTAAAAATACAACTAATGATAAAGAATGGAGTTGGTCAGATGTCTCAAATCCCATATTTAAGTGCTCAGACAAGGTTTGGTCATCGGTCTCGTCTCTTACATCCAATATAATGAAGATCTCAGTCAAGGATGCTTCCGAAAGCTTAACAAAAGGTGCTAGTCAACCTTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGATGCATGTGATCCATTAATTGTGATCCTTCATGGGGGACCACATTCTGTCTTATTGTCAAGCTTTTCAAGGCCATTGGCTTATCTTTCTTCGGTTGGATATAGCTTGTTAATTGTTAATTACAGAGGCTCAGTAGGATTTGGCGAGGAAGCCTTGCAATCTCTTCCAGGAAAAGTTGGCTCTCAGGATGTCAACGATGTGCTCACTGCTATTGATCATGTCATTGATTTGGGACTCGCCAGTCCTTCAAAGATTGCAGTTCTTGGTGGCTCACATGGTGGCTTTCTAACAACCCACTTGATTGGCCAGGCACCTGAGAAATTTGTTGCAGCCGCTGCAAGGAATCCTGTGTGTAACCTTGCACTGATGGTTGGTACAACCGATATCCCTGATTGGTGCTATGTGGAGACTTATGGAACCGAGGGTAGAGACAAGTTTACTGAAGCACCTTCAGCAGCGGATCTAACTCTATTTTATAGCAAATCTCCTATTTCACACCTCTCAAAGGCAAAAACACCAACGCTTTTTCTACTTGGTGCCCAAGATCTCCGTGTTCCAATTTCGACTGGACTACAATATGCTCGGGCTTTAAGGGAGAAAGGAGTACCAACAAAAGTCATCGTGTTTCCAAATGATGTTCATGGAATTGAAAGACCACAGTCCGACTTTGAGAGCTACCTTAACATTGCGATCTGGTTTAACAAGTATTGCAAATGA 2283 0.4472 MEDENQATEQEYAFHSDLLHQFTVIPSVDKAWLFNSHAGLASQAMFCVSQPNLLTNKRKKSILSASLLRQSDGTVAFHWAPFPIELSGVSAMVPSPSASKLLIVRNPENEGPCRFEIWSSSQLEKEFHVPQSKHGSVYTDGWFEGISWNLNETCIAYAAEEPAPAKPTFNDLGGYQKRSSSDKDGGTWKAQGEWEEEWGETYAGKRQPALFVIDITSGEVQAVKGIDKSLSVGQVVWAPAIEGSVQYLVFVGWSFETRKLGIKYCYNRPCAIYAVKAPHHESKANETETYSTEDVQAVNLTQTLSSAFFPRFSPDGKFLVFVSARSSVDSGAHSATDSLHRMDWPEDMKLYQSSKIHEVIPVVLFAEDGSFPGLYCSNILSDPWLIDGQTLVIASVWHSNQVLLSINVLSGEILRITPDNSNFSWSLLTLDGNNILAVSSSPVDVPQIKYGAIVKNTTNDKEWSWSDVSNPIFKCSDKVWSSVSSLTSNIMKISVKDASESLTKGASQPYEAIFVSSKTKKSDACDPLIVILHGGPHSVLLSSFSRPLAYLSSVGYSLLIVNYRGSVGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVETYGTEGRDKFTEAPSAADLTLFYSKSPISHLSKAKTPTLFLLGAQDLRVPISTGLQYARALREKGVPTKVIVFPNDVHGIERPQSDFESYLNIAIWFNKYCK 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02745 760 ProSitePatterns Prolyl endopeptidase family serine active site. 588 618 IPR002471 GO:0004252|GO:0006508
Vian3g02745 760 Gene3D alpha/beta hydrolase 507 758 IPR029058 -
Vian3g02745 760 Pfam WD40-like Beta Propeller Repeat 300 330 IPR011659 -
Vian3g02745 760 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 8 282 IPR045550 -
Vian3g02745 760 SUPERFAMILY alpha/beta-Hydrolases 522 759 IPR029058 -
Vian3g02745 760 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 5 759 - -
Vian3g02745 760 Pfam Prolyl oligopeptidase family 543 759 IPR001375 GO:0006508|GO:0008236
Vian3g02745 760 FunFam Acylamino-acid-releasing enzyme 499 759 - -
Vian3g02745 760 SUPERFAMILY DPP6 N-terminal domain-like 85 446 - -
Vian3g02745 760 Gene3D - 279 506 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02745 Vian-Chr3 42344082 42354208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02745 476 743 Carbohydrate Esterase AT5G36210 25.368 3.88e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02745 K01303 - gmx:100803600 1330.08