Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02741 ATGGAACCCCGCATTGTGCGCGAGATCGACGCTATGCGCCGTCTCCAGAACCACCCAAACATCCTCAAAATCCACGAGGTTCTCGCCACGAAGACCAAAATTTACCTCGTCGTCGACTACGCCGGCGGCGGCGAGCTCTTCTCCAAGATCTCCCGGTGTGGCCGCCTCCCGGAGTCTCGGGCGCGGCGCTATTTCTCCCAACTCGTCTCTGCGCTCCTCTTCTGCCACCGCCACGGCATCGCGCACCGCGACCTCAAGCCGCAGAACCTCCTCCTCGACGCCGCCGGCGACCTTAAGGTCTCTGACTTCGGCCTCTCCGCACTCCCGGAACACCTCCGTGATAACCTCCTCCACACCGCATGTGGCACGCCGGCCTTCACTGCGCCGGAGGTCCTACGCCGCGTCGGCTACGACGGTTCCAAGGCCGACGCTTGGTCCTGCGGTGTCATTCTCTACAACCTTCTCGCCGGCCAGCTCCCCTTTGACGATTCGAACATTCCTGCCATGTGCCGCCGAATATCCCGCCGCGACTATCAATTCCCGGCGTGGATCTCAAAATCCGCGCGCAGCCTCATCCACCAATTGCTGGACCCCAATCCTAAATCGCGAATTTCGCTTGACAGAGTTTTCGATAACAGATGGTTAAGGGATAAGAAGCATGTTTGCTATAATGTGTTGGAGGAGAGTGTTGTGGAGTCTGATTTATATAACAAGTGCTGCGACGGTTACAAATTGGGGATGAACGCTTTTGACATAATATCAATGTCGTCGGGGTTGGACTTGCGAGGGCTGTTCGAAACGACGTCGGAGAAGGGGAGGCGGAGGGAGAAGAGGTTCAGTTCGGAGAAGAGCGTGGGAACGGTGGAGGCGAAGGTGAAGGAGGTTGGGGAGAGGTTAGGGTTTAGGATTGAGGTTGGAAAGAACGGTGTAATTGGGCTAGGAAAGGGGAAAGTGGGTTTGGCAGTTGAGGTGTTTGAGATTGTGTCTGACTTGCTCCTTGTTGCTATTAAAGTTGTAGATGGTGCTATGGAGTTTGACCAACTTCATTGGGATGATTGGAAACTTGGCCTTCAAGATGTTGTTCTCTCATGGCATCACAATGAGTAA 1107 0.551 MEPRIVREIDAMRRLQNHPNILKIHEVLATKTKIYLVVDYAGGGELFSKISRCGRLPESRARRYFSQLVSALLFCHRHGIAHRDLKPQNLLLDAAGDLKVSDFGLSALPEHLRDNLLHTACGTPAFTAPEVLRRVGYDGSKADAWSCGVILYNLLAGQLPFDDSNIPAMCRRISRRDYQFPAWISKSARSLIHQLLDPNPKSRISLDRVFDNRWLRDKKHVCYNVLEESVVESDLYNKCCDGYKLGMNAFDIISMSSGLDLRGLFETTSEKGRRREKRFSSEKSVGTVEAKVKEVGERLGFRIEVGKNGVIGLGKGKVGLAVEVFEIVSDLLLVAIKVVDGAMEFDQLHWDDWKLGLQDVVLSWHHNE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02741 368 Gene3D Transferase(Phosphotransferase) domain 1 1 249 - -
Vian3g02741 368 Gene3D Kinase associated domain 1, KA1 250 362 - -
Vian3g02741 368 Pfam NAF domain 247 304 IPR004041 GO:0007165
Vian3g02741 368 SUPERFAMILY Protein kinase-like (PK-like) 3 227 IPR011009 -
Vian3g02741 368 FunFam Maternal embryonic leucine zipper kinase 1 239 - -
Vian3g02741 368 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02741 368 SMART serkin_6 3 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02741 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Vian3g02741 368 ProSiteProfiles NAF domain profile. 242 266 IPR018451 GO:0007165
Vian3g02741 368 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 312 - -
Vian3g02741 368 Pfam Protein kinase domain 4 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02741 368 CDD CIPK_C 248 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02741 Vian-Chr3 42316757 42317863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02741 1 367 Miscellaneous Gene Families AT3G23000 57.105 2.20e-142 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vian3g02741 Pkinase 1.1e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02741 K12761 - gmx:100305372 603.979