Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02715 ATGAGGTACGTTGAGATTGGAAGGGTTGCTCAGATCAACTACGGCAAAGAGTATGGGAGGCTAGTAGTCATTGTCGACGTCATTGACCAGAACAGAGCTCTTGTGGATGCTCCCGATATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTGTCACTCACTGACATTAAGATTGATATCAAGAGGGTCCCAAAGAAGAAGGATCTCATTCAAGCCATGGACGCCGCTGGTTGGTGGGAGAAAAGTTCATGGGGCAGAAAACTGATTGTGCAAAAGAGAAGGGCATCCCTCAATGACTTTGACAGGTTCAAGATTATGTTGGCAAAGATCAAGAGGGCAGCAGTTGTTAGGCAAGAGCTTGCCAAGCTGAAAAAGAGTGCTTCTTAG 384 0.4688 MRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKIDIKRVPKKKDLIQAMDAAGWWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAAVVRQELAKLKKSAS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02715 127 FunFam 60S ribosomal protein L14-1 1 83 - -
Vian3g02715 127 SUPERFAMILY Translation proteins SH3-like domain 1 86 IPR008991 -
Vian3g02715 127 PANTHER 60S RIBOSOMAL PROTEIN L14 2 125 IPR039660 GO:0003723|GO:0003735
Vian3g02715 127 Pfam Ribosomal protein L14 42 111 IPR002784 GO:0003735|GO:0005840|GO:0006412
Vian3g02715 127 Gene3D - 86 121 - -
Vian3g02715 127 CDD KOW_RPL14 4 76 IPR041985 -
Vian3g02715 127 Gene3D - 1 81 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02715 Vian-Chr3 42050108 42051711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02715 2 127 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 79.070 1.04e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02715 K02875 - gmx:100817659 231.106