Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02687 ATGGTAGGAGAACTCAGAGTGTTGACTGCACTTGATGTAGCGAAGACACAATGGTACCACTTCACAGCAATTGTGATAGCAGGAATGGGTTTCTTCACTGATGCCTATGACCTCTTCTGCATTTCCCTGGTTACTAAGCTGTTAGGGAGACTGTACTACACAGAACCAGGTGCACCAAAGCCAGGAACTCTTCCTCCAAGAGTTCAAGCTTCTGTCACTGGTGTTGCTCTCTGTGGCACCTTGGCTGGTCAACTATTCTTTGGTTGGCTTGGTGACAAATTGGGGAGAAAAAGGGTCTATGGTCTCACTCTTGTGCTCATGGTGGTGTGCTCCCTTGCCTCAGGACTCTCCTTTGGCTCCACTCCAAAGGGTGTCTTGGCCACACTTTGCTTCTTCAGGTTCTGGCTAGGGTTTGGGATTGGTGGTGACTACCCTCTTTCTGCCACAATCATGTCTGAATACGCCAACAAAAAGACTCGTGGGGCATTCATTGCAGCAGTGTTTGCCATGCAAGGATTTGGAATCTTGGCTGGTGGAGTAGTCGCCTTGATTGTTTCATATGCGTATGACCAAAAGTACAACCTTCCCACATACGAACAAAATCCAGAAGCCTCCATTGTGCCGTCATTTGACTATGTTTGGAGAATCATTTTGATGTTTGGTGCAATTCCGGCAGCACTCACCTACTACTGGCGCATGAAAATGCCTGAGACTGCACGTTACACAGCCCTCGTGGCCAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTGTTGCAAGTGGAACTTGAAGCTGAAGAGGAGAAGGTGCAGAAACTGACACAGGAAAAGAGCCACAGGTATGGTTTGTTCAGCAAGGAATTTCTCAGACGCCATGGCCTGCATTTGGTTGGAACCACCACCACTTGGTTCTTGTTGGACATAGCATTCTACAGCCAGAACCTTTTCCAAAAAGACATCTTCAGTGCAATTGGGTGGATCCCTCCAGCACAGACAATGAATGCAATTCATGAGGTATACAAGATTTCAAGAGCACAAACACTGATAGCATTGTGCAGCACTGTGCCAGGTTACTGGTTCACAGTGTTTCTGATTGATTACATGGGCCGTTTTGCCATCCAATTGATGGGGTTCTTCTTCATGACAGTATTCATGTTTGCTTTGGCTATACCATATGATCATTGGACTAAGAAAGCAAACAGAATAGGGTTTGTGGTGATATACTCCCTCACCTTTTTCTTTGCCAACTTTGGTCCAAATTCCACCACATTTGTTGTGCCAGCAGAGATCTTCCCAGCAAGGCTTAGGTCAACCTGTCATGGAATCTCTGCTGCTGCAGGAAAGGCTGGTGCAATTGTGGGAGCATTTGGGTTCCTATATGCTGCACAAAGCAAGGACCCTAAAAAGACTGACGCAGGGTACCCTACAGGAATTGGGATTAAGAACTCACTCATTGTGCTTGGGGTTATCAACTTCTTTGGAATGTTGTTCACCTTGCTGGTTCCTGAATCAAAGGGTAAGTCACTGGAGGAGTTGAGTGGGGAGAATGATCGAAGTGCTGATGCTGATGCTGAGCCTGAAGTTTCTGCTACGACAAGTCGTGTTTGA 1611 0.4662 MVGELRVLTALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYTEPGAPKPGTLPPRVQASVTGVALCGTLAGQLFFGWLGDKLGRKRVYGLTLVLMVVCSLASGLSFGSTPKGVLATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVALIVSYAYDQKYNLPTYEQNPEASIVPSFDYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEEKVQKLTQEKSHRYGLFSKEFLRRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQTMNAIHEVYKISRAQTLIALCSTVPGYWFTVFLIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKANRIGFVVIYSLTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPKKTDAGYPTGIGIKNSLIVLGVINFFGMLFTLLVPESKGKSLEELSGENDRSADADAEPEVSATTSRV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02687 536 FunFam Inorganic phosphate transporter 1-6 19 527 - -
Vian3g02687 536 CDD MFS_PhT 24 506 - -
Vian3g02687 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Vian3g02687 536 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Vian3g02687 536 Pfam Sugar (and other) transporter 24 513 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian3g02687 536 MobiDBLite consensus disorder prediction 511 525 - -
Vian3g02687 536 NCBIfam phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vian3g02687 536 Gene3D MFS general substrate transporter like domains 19 530 IPR036259 -
Vian3g02687 536 MobiDBLite consensus disorder prediction 511 536 - -
Vian3g02687 536 Coils Coil 250 277 - -
Vian3g02687 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02687 Vian-Chr3 41662454 41664141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02687 4 522 Inorganic Solute Cotransporters AT3G54700 80.154 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02687 K08176 - gmx:100780201 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02198 2 42017073 42018695 Vian3g02687 3 41662454 41664141 PCT